NONHSAT113463
Revision as of 01:55, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113463 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
695 nt |
Genomic location |
chr6+:71874779..71875473 |
Exon number |
1 |
Exons |
71874779..71875473 |
Genome context |
|
Sequence |
000001 ATGTGCGGCA ATAACATGTC AACCCCGCTG CCCACCATCG TGCCCGCCCC CCGGAAGGCC ACCACTGAGG TGATTTTCCT 000080
000081 GCATGGATTG GGAGATACTG GGCACGGATG GGCAGAAGCC TTTGCCGGTA TCATAAGTTC ACATATCAAA TATATCTGCC 000160 000161 CGCATGCGCC TGTTAGGCCT GTTAACATTA AATATGAACA TAGCTATGCC TTCATGGTTT GATATTATTG GGCTTTCACC 000240 000241 AGATTCACAG GAGGATGAAT CTGGGATTAA ACAGGCAGCA CAAAATATAA AAGCTTTGAT TGATCAAGAA GTGAAGAATG 000320 000321 GCATTCCTTC TAACAGAATT ATTTTGGGAG GGTTTTCTCA GGGAGGAGCT TTATCTTTAT ATACTGCCCT TACCACGCAC 000400 000401 CAGAAACTGG CAGGTGTCAC TGCACTCAAT TGCTGGCTTC CACTTTGGGC TTCCTTTCCA CAGGGTCCTA TCGGTGGTGC 000480 000481 TAATAGAGAT ATTTCTATTC TCCAGTGCCA CGGGGATTGT GACCCTTTGG TTCCCCTGAT GTTTGGTTCT CTTACGGTTG 000560 000561 AAAAACTAAA AAACATTGGT GAATCCAGCC AATGTGACCT TTAAAACCTA TGAAGGTATG ATGCACAGTT CGTGTCAACA 000640 000641 GGAAATGATG AATGTCAAGC AATTCATTGA TAAACTCCTA CCTCCAATTG ATTGA |
Predicted Small Protein
Name | NONHSAT113463_smProtein_317:538 |
Length | 74 |
Molecular weight | 8598.0653 |
Aromaticity | 0.191780821918 |
Instability index | 43.797260274 |
Isoelectric point | 6.23870849609 |
Runs | 13 |
Runs residual | 0.0339372514361 |
Runs probability | 0.0456021632493 |
Amino acid sequence | MAFLLTELFWEGFLREELYLYILPLPRTRNWQVSLHSIAGFHFGLPFHRVLSVVLIEIFL FSSATGIVTLWFP |
Secondary structure | LHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLEEEHHHHHHHHLLLLLEEEEEEHHHLHHH HHLLLLEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHH HHHHHLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTT TTTTToooooooo |