NONHSAT113500

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT113500

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

662 nt

Genomic location

chr6-:72110768..72186527

Exon number

4

Exons

72110768..72111117,72182834..72182983,72183744..72183867,72186490..72186527

Genome context

Sequence
000001 GAAGCTTTGA TTTTACCTGT TTTTATACAC TGATTTAAGA GAGATCAACA GCAGTGTATT AGTCATATGT ACTCACAGAC 000080
000081 CACGGGAGAG GGACACCATG CCAACAGGGT CACATGGAGC CTGTGCTCAG GAACAGAGTG GATGACAAGG ATTGTGGGAG 000160
000161 GCGAGATACA GGGGTTAGAG CACAAATTGT GCAGTGCCCC TTAGCATTTG ATTTTTACTG AAAGATGGGA ACCCAGAAAA 000240
000241 GGGATGTGGG TAAAAGAATG GCCTGCTATT TGACCAACTT TTCTTTTCAT CTCTCGAAGA GCCTAGCAAA GTACCACTAC 000320
000321 GTGGACAGAG TTACCATGCA TGTGCTTAGG TAAGATAAAC TAATATTTAA CATAAATTAG AAACCCTTAC TAATTGCTTT 000400
000401 CATGTGTTTT TTTTCTTACT ATAATTTTTA AAATTTCACA TATCAGCATA ATAAAATATC TATAAACTAA AACATAAAAT 000480
000481 TCTTAAAATG GACTGTAGTA AGTCAGTTAC TGAAAATAAA ACACTGTCAA AATGTGTTAG TTAAATGTAA TGTGAGTGTT 000560
000561 GCTATAAAGT TAGTAATGTT TAAAAAATAG CACCACACTG AGTAATCATC AAAAGTATTA TACATTTAGT TTTTATTCAT 000640
000641 GATTTGCCAA AATAAAAATT GG
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Predicted Small Protein

Name NONHSAT113500_smProtein_224:352
Length 43
Molecular weight 4989.8263
Aromaticity 0.119047619048
Instability index 47.8976190476
Isoelectric point 10.1292114258
Runs 9
Runs residual 0.038125376733
Runs probability 0.038715185774
Amino acid sequence MGTQKRDVGKRMACYLTNFSFHLSKSLAKYHYVDRVTMHVLR
Secondary structure LLLLLLLLLHHHHHHHHLLLHHHHHHHHHHLEELLEEEEEEL
PRMN -
PiMo -