NONHSAT142152
Revision as of 03:04, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT142152 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
562 nt |
Genomic location |
chr16+:34368885..34369446 |
Exon number |
1 |
Exons |
34368885..34369446 |
Genome context |
|
Sequence |
000001 TGAAGAATAC CTCTTTTTTC CAAGCTGGTG TTGGAATCTC AACCGTCAAC TTCCTCATTT TCTTCACACT TCTTCTATAA 000080
000081 TGCAGGCCTA AGCCCACTGA CCTGACCATT AATCACCTGG CCTTCATCCA CATAGTGATG CAATGGTGTC ATTGTTTTCT 000160 000161 CCAGGTGTGT TTGAGTCACT GTATTTTCAG AATGACTTCA AGTGTAAAGT ATTTTCCTAC CTAAACAATA TAATAAGATG 000240 000241 TTTCTCCAGT TGCACAACCT GCCTCCTGAG TGTTCTTCAG GCCATAATTA TCAGCCCCAG CAGCTTTTGG TTGGTGAGGT 000320 000321 TTAACCATAA ATCCACCGTT TTCACCTGCC ATTTCTTCTT CTTTTCATGT TTTCTCAGGT TTTTTTTTTT AGTAGTAATC 000400 000401 TCATCTTGTA CACTATAGCT TCTTCCAGTG TGACCCTGAG CAATCTTCTG CATATCAGTA AATACTGTTC GCTTTTCTAT 000480 000481 CATCAGAAGA CTGTTTCTTA CTCTGTCATT ACCCAGAGAT GTTTTGCTTA TAAGGATAAT GCTGCTTTCA AGTACATGCA 000560 000561 TG |
Predicted Small Protein
Name | NONHSAT142152_smProtein_137:223 |
Length | 29 |
Molecular weight | 3397.0681 |
Aromaticity | 0.178571428571 |
Instability index | 46.1214285714 |
Isoelectric point | 8.50738525391 |
Runs | 7 |
Runs residual | 0.0467806841046 |
Runs probability | 0.0110909228556 |
Amino acid sequence | MQWCHCFLQVCLSHCIFRMTSSVKYFPT |
Secondary structure | LLHHHHHHHHHHLLLEEEELLLEEELLL |
PRMN | - |
PiMo | - |