NONHSAT143899
Revision as of 03:11, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT143899 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
882 nt |
Genomic location |
chr16-:80601476..80603566 |
Exon number |
4 |
Exons |
80601476..80601656,80601845..80602010,80602704..80602793,80603122..80603566 |
Genome context |
|
Sequence |
000001 AGCCATCATG GTAGGGTGTC CAGGGTGAGG GGAGGGTGGT GTGAATCCCC AGTAATGCAG GTCCTTTCCA GGCCAGGCCC 000080
000081 CTGGTCCCCA GGAGTGCGGG GATGCCTGAG GTCTACTGCT GCCTTATCCA GAGCTGCCAT CCCCGGCGAT GACTCAGAGT 000160 000161 TCCTGTGGCC CCAGCATCAT CCCTCCATCC CTGGCTGTGA GGCAGGAGCA GAGTTGCAGA CCTGAGAGGC CTTGAATTTG 000240 000241 TTTGATATAG GACTTTGCCA CCAGACAAAG TGCTTTGCCT GTGAGGTCTG GCTTGGCCTG GCCTCTGAGA AAGAACAAAC 000320 000321 ACAGACCTCA CTGGAAGGAA CCTGGAGAAC GGGAGAGGAG AGGCTGCTGC TGTCTGCCCT CCCAGCAGCA GATATAAAGA 000400 000401 CAATGGGCTT CTAAGTCCCC TAGAGTCcca gctgtgtaat ttaagGAAGG AGCATGGAGA AGACAAGAAC AAGGCTCTCA 000480 000481 GAAGGAAATG GTGTGGCTGG AGCCATGAGA ACTggttgtg gagggggtga ggaagGCAAA TATAATTTCT GACCTACGTA 000560 000561 ATGATGTATG CACAAGAAGC CTCTCTTGAa tgtattaatt cagtaaacag ttatggagtc cttacaatgt gctagtggga 000640 000641 ctttgaagat gaatccaaat ttggatcctg gcctggaaag gctcaaagcc caatatggga gCCTGGATAC AAATGTGAAA 000720 000721 CTTATCTTCT TTTATTAACC AATCAATCAC CTCCTGCCAA AACAACATCA Gcaaaaacaa cagaaaaaaa caaaaacaaa 000800 000801 aacaaaaaca aaTCTGTGTa cacaagacct ttgtttccac agcagacttg gctaaaggtt tgggcatgca tatgcatacc 000880 000881 cc |
Predicted Small Protein
Name | NONHSAT143899_smProtein_560:634 |
Length | 25 |
Molecular weight | 2658.0756 |
Aromaticity | 0.0833333333333 |
Instability index | 50.9125 |
Isoelectric point | 3.79461669922 |
Runs | 5 |
Runs residual | 0.0267857142857 |
Runs probability | 0.0380321497969 |
Amino acid sequence | MMYAQEASLECINSVNSYGVLTMC |
Secondary structure | LLHHHHHHHHHHHHHLLLLLEELL |
PRMN | - |
PiMo | - |