NONHSAT117584

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT117584

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

428 nt

Genomic location

chr6_mcf_hap5-:1015472..1017360

Exon number

2

Exons

1015472..1015749,1017211..1017360

Genome context

Sequence
000001 AGGAAATTTC TGGTGGGCCT TCGCGGCTCC GCTGGGTTGG CAGCCGCTTG AGCCACTGCG AGGAAAGCAA AGTCTGGGCC 000080
000081 ATGGAGATGA GCCTAGTCCT GCTGTTCCTG ATCCGCACTG CCCTTTTTGC ACCCCAGGGA GCTGCTGCTG acggcgcctc 000160
000161 cctctgtcgc caaagttgga gtgcagtggc gcggtctcgg ctcactgcaa gctccgcctc ccggattcaa gtgattcccc 000240
000241 tgccttagcc tcctaagtag ctgggattac aagtgcccac caccacaccc ggctaatatt ttgtatttta atagagactg 000320
000321 ggtttcacca tgttgaccgg gatggtctca atctcctgac ctcgtgatct gcctgcctaa gcctcccgaa gtgctgggat 000400
000401 tacaggcgtg agccaccaca cctagctg
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Predicted Small Protein

Name NONHSAT117584_smProtein_80:247
Length 56
Molecular weight 5830.8052
Aromaticity 0.0545454545455
Instability index 51.7727272727
Isoelectric point 11.4000854492
Runs 11
Runs residual 0.0484848484848
Runs probability 0.0322461498933
Amino acid sequence MEMSLVLLFLIRTALFAPQGAAADGASLCRQSWSAVARSRLTASSASRIQVIPLP
Secondary structure LLHHHHHHHHHHHHHHLLLHHHHLLHHHHHHLHHHHHHHHHHHLLLLLEEEELLL
PRMN -
PiMo -