NONHSAT119949

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT119949

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

575 nt

Genomic location

chr7-:31420784..31427425

Exon number

4

Exons

31420784..31421021,31421510..31421714,31422950..31423043,31427388..31427425

Genome context

Sequence
000001 AGGAGTTTGA GACCAGCCTC GCCAACATGG TGAAACCCAC TGGGTGTGGT GCTTTTGGGA GGTAGATTTT CATTAATAGT 000080
000081 CTAAATTCTT TCAGAATATT AGGATTTAAA TCCTTTGAAA ATATTAAAGC ATTTCATTTT CATTATCTCC CCTTTTCATT 000160
000161 AAATATCTAG CATGTTCATT AATGTTCACT GCTGTATAGT ATTTCATTAA TGAATACACT ACCATTTATT TACTCACTTT 000240
000241 CTTATTCATG GATATTTTAC CTCTTTCATA GCCAAAGTAT GTCCTTTTTA GACATGTCTT CCATGTACAT ATATAAGAGT 000320
000321 TTCTCCAGGG TATATGTGGT CTTATTTGAA TTTTCCTGAT AGTTGAAGAG ATTGAGCATC TTCATGTTTT TCTTTACTTT 000400
000401 TTAGTTTAGT TTTCTTTATT CTATTTCTCT ATTTTAAAAT TTCTTCTTAT TGATTTGTTG ATACCATATA TTTACATATA 000480
000481 TCTGGGTGCT AATTCTGTAT TGATTATACA AGCTGGAAAT ATCTTCTCGA GGCCGTGGGT TGTCTTCTCA CAGTTTTGTT 000560
000561 TTGTTTTTTA ACTCT
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Predicted Small Protein

Name NONHSAT119949_smProtein_209:358
Length 50
Molecular weight 6004.9187
Aromaticity 0.285714285714
Instability index 64.5655102041
Isoelectric point 6.50347900391
Runs 11
Runs residual 0.0624379481522
Runs probability 0.0256780845016
Amino acid sequence MNTLPFIYSLSYSWIFYLFHSQSMSFLDMSSMYIYKSFSRVYVVLFEFS
Secondary structure LLLLLLEEEELHHHHHHHHHHLLLLHHHHHHEEHHHHLEEEEEEEEEEL
PRMN LLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLL
PiMo oooooooTTTTTTTTTTTTTTTTTTiiiiTTTTTTTTTTTTTTTTTToo