NONHSAT120415

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT120415

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3110 nt

Genomic location

chr7-:45022622..45026236

Exon number

2

Exons

45022622..45022921,45023421..45026236

Genome context

Sequence
000001 AGACCTGTAC TCCGTACTCC GTACTTCGTA GTCGCAGCGG CGCGGTCTTC GGCAGTCTAG TCATCCACCG CCATCCTGGG 000080
000081 CCCCACGTGT TGCCTGACCA TTCCTGAGCC CAGGTAGGGG TCCTGGGGGA TTGGGTTCAG TGGCGGGCGG CGTGGGAGGC 000160
000161 TGGGCCGCAG TGAGTGGGGG CACCAGTGAT TCTTGGAGAC CAAGCCTTCA CTACACGTGC TACTTCCTCT CAAGAGGCGG 000240
000241 TTGAGCGCGT TCGGAACATT TTACCCGGAG GAGACTCGGG GATTACTTGA TGAGTAACCT CGTGCTTCTC TTTCAGCCGA 000320
000321 GAAGTGGGGC TTCTGCATGA CCTGGGTGGA CCCCAGTAGG TGGGATGGGA CGTGTGGTCA GGAGGGACCT CACCGGAAGG 000400
000401 CATGGGGTGG CGTGTAGACC TGCCGCAAGA GAGGCTGTAG AGTGGGCCAG GCGTTGCAAG GAGCTAGAGC TGGATAATGG 000480
000481 TTCAGAGGCA CAAGCTGAAG CTAACTGCGT TTGGAGCTAA CTGCATTTGT TCCCTTCTAG GTGGGAGCCG TGGCTGAGGT 000560
000561 GACGGTCTCA AAGTGGAAGA GCTTACTGTC ACAGCAACTC CTTTGCAAGA TGCCCCGGTA AATCACGTTG CAGAGACCCC 000640
000641 AACTCTGCCT TCCTGGAACT AGGCCTGCGT TTTCTCTGAA CCATTATTTC ATGGGGAAAA TGAAATCTAC TTCATGTGCC 000720
000721 TGGTCTACTT ACTCCTTCAG AAGTGATTTC TGAGCCGTAA GATACATGAG AAAAAAATGA AGGGGAAAAG GCAGTATTTA 000800
000801 TATTAACTAC ATGATGATAA GGATGTTTCT GGTCACAGTG AAAAGCCATG CTAGAATTGT AGTGTCATAG AATAATGTGG 000880
000881 AAGTTTAGTT CGTGTTGTCT GATCTATTTA ATAATTTAAT AAGGTTATCT CTTCCAAGAC ACCTTCCCTT CTTCCTCAGC 000960
000961 CAGAAAGGAT CTTTCCCTGA GAGTCATTAG TAGCTCTGGG CTCCTGGAAC CAAGCTCAGG TGCCTAATTG AACTCTGGTC 001040
001041 TCTTCCCACA GCCCCCAGCA GGGACTGGTG CTTAGTGAGA GTGGACTGCC AGATTCCTTG AGTGTGGGGG ATTTGGGTGA 001120
001121 ATGAGGGTAG CAAGCCTCCA GCGTGCTTGG GTCTGCGGTG ACCCTATGCA TTCCTTCAGT GCTTGCTAGA ACAGTTTTGA 001200
001201 AACGGTTTGA GGCCTTGCCC TGCTCCATCC AGAGCAAGGT TATAGAAATT TCAGACAATG ACTTCCTCCC TCCTGGATCT 001280
001281 AGTGTCCTGG GCCTTGTATA GATCCGTGCC ATCTAATGTG GTAGCCACTT GGCACACATG ATTAAATTAA ATTTGGAGTT 001360
001361 TTATTTCATT TTCACACTAG CCACATTTCA GATGATCAGT AGCCACAGGT GGCCAGTGGC TACCATATTG GACCGCACAG 001440
001441 ATTAGAGGGC ATTTCTGTCG CTGTGGAAGT TGTTTTGGAC AATGCTGGTG TGAAAGGTGA AGGGAATCCT GAGTGTTTGC 001520
001521 TGTGCTCCAG GCTCAGTACA AATTTTATTT TATTATACAC TTAAAGCAAA AGTCTTATAA AAGTTGAGGA TGAAGCCAAG 001600
001601 AGTGGTGGTA AGGGTAGGAG TTGAAACAGT GAAGAGGAAT AACAGGGAAG AGTCCTGCCC TGAGAGACTC ATGGAATAGG 001680
001681 ATATTTACAA GGCAAAGCAA AGAGAACCAA AGTCTCAGTT CTGCAGAGGA GCTGAGTGCC CCAGGAGCTA GTGGAGGGTG 001760
001761 AGGTCAATGT GTGCTCATCT TAAAGGAAAA ACTCATGGAA GAGGAAGGTG CTAATGTTGA ACACCTATTT TGCGCCAGAC 001840
001841 CTCTTAATTG TTTTAAATCT TTGAGGTATC ATCATGAGGT CGTTTTTAAG TTCAGTACAG ATGAGGGGCC CAAGGTCAGA 001920
001921 ATTATGTGTC CAGGGTTGCC CAGCCACAAA CCAGCAGATC AGGGTTTGAT GCCAGGCCTC TCTAACCCTG CATCCTGAGT 002000
002001 GGAATATAGA AGCCGGTGGG AAGTTTGGAT GGGAAGGAGA TGGATGCCTT CAAGTTCTTG TCTTGGTGTT AGGTGTGTTA 002080
002081 AAGGACTGGC TGGGATGAGA AGAGTGTTGC TGGCTTGAGC ATAGCACGAG CAGCACAGCT CCTGTGTTCC TCTGGGTGGT 002160
002161 GGGGTCACCT CTCTTAAAGG TAGAGGCTTT CAGCTGATTC TGTCTTTTCA GGCCAGGAAT AGTTGCTGAA CACCCCAGGC 002240
002241 CTGCTGAGGT CCCTCCTTGA GTCTCATGTT CAAGCAGTCT TGTGAGTAAA GCACTGGCTA CCCCTTTTCA CTTACTATCT 002320
002321 TTTCAAGCAT GTTCTACCAC CTTGGAAGGT AAGAGGTTAG TACCTTCTTC CAGAGCAGAG GGCAGGCATT CTTGCTGTGC 002400
002401 GTTGTGAAAG GGTAGAGTCC TGCGCTCCTT TCTTGTAGTA GTCCAATGGC TCATGCAGGT GCCTCTGACT CCCCTATGGG 002480
002481 AACTGGGGCT TGGGAGGGTG GTGGAAAATG CTGATGCTCT GGCTATTGCT ATTGTTTTGA ATAATCAGTG GTCCCTTGTC 002560
002561 CCTAATCGAG GAATTTTGTA TTTTCTACCA GTGTCCATGA AACTGGGAGG CGACCGTGTT AGCTGCCAGT TCCTGACAGC 002640
002641 CACCTCTCAC CAGTGGCTTC ACTCTGTGTC CCTGACCCAG CACATGGCAC AAGAGTGCCT GCCATCCGTC AGTGTTTCTA 002720
002721 CAGCAGCAAT CCCAAGATGC TGGAGCTAGA GGGGACCTGA CCTGAGAGAA GATACCTTCA GTGGCTGCCA GGCTGTTCCT 002800
002801 TGGAACCTGT GCAGGGATGA GGCCTGCCTG TGTTAATACA CCTAGTGAGG AGTGGAGCTG AATTTGAATG CAAGCCTTGG 002880
002881 CACCTTAATT GAGCAAGTTT GAAACCTCGC TTGTTGCCCT TCTGGAAGGA GTCAGGAATT TCCAGTTCTG GGCCTGGGCT 002960
002961 GTGGGTCTGG CAGACAGACC TCTGGCCCTA GGTTTGGGTG CCAGGTTCTC TGCTTCCAGA ATGAGAAGCT TTGCTGTGCA 003040
003041 CCAGGACCTG GGCCCTTCTG GTATCTCCTG AATGAAAAAC AAGGGATATT TAATAAATAT GGATTTAAAT
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Predicted Small Protein

Name NONHSAT120415_smProtein_1337:1444
Length 36
Molecular weight 4219.9222
Aromaticity 0.171428571429
Instability index 48.4231428571
Isoelectric point 6.52020263672
Runs 7
Runs residual 0.0188861985472
Runs probability 0.012012012012
Amino acid sequence MIKLNLEFYFIFTLATFQMISSHRWPVATILDRTD
Secondary structure LEEELHHHHHHHHHHHHHHHHHLLLLLLEEEELLL
PRMN -
PiMo -