ENST00000587276.1
Revision as of 11:06, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000587276.1 |
Source |
Gencode19 |
Same with |
NONHSAT059101 |
Classification |
intergenic |
Length |
470 nt |
Genomic location |
chr18-:42748565..42761079 |
Exon number |
4 |
Exons |
42748565..42748783,42749061..42749104,42759851..42759943,42760966..42761079 |
Genome context |
|
Sequence |
000001 ACACAGTGAT GGCCTGCAGT GGTGAACCAG TGAGGGAACA AGTCCTATGG TTGGGGAGCT ACCTGAGGCT GGAGAGCAGA 000080
000081 GTACAGCCAG GCCCACAGTG GTGCAGCATA CCAGAGTCAA GGTCTCACTA GGATGTCCAG GCTGGCCTCG AACTCCTGGG 000160 000161 CTCAAGCAAT CCACCTGCCT TGGCCTCTGA AAGTGCAGGA ATTACAGAGG AGTGTATTTA GAGTCAACAA CCACACATGG 000240 000241 CTAATCTCTC AGAATGTTTC ATCATGAGAT GTGAGCATCA TGTTCCAGGC CCTGAGTGCT TCATAAAAAA AAAAGTTCCT 000320 000321 TTTCCACCAA AACAATGCCC TGATTTGAGT GCTTCATCAA AAGAGAAAGA TTTCTCATGA TAAACCATAT TCTAAGCACT 000400 000401 TAGATCACAA TATAGTAAAT TTTCAAAAGG AAGTCACTTT TGCCAAGATA TAAAGGCTCA TGTACGTAAA |
Predicted Small Protein
Name | ENST00000587276.1_smProtein_236:379 |
Length | 48 |
Molecular weight | 5338.212 |
Aromaticity | 0.0851063829787 |
Instability index | 60.9872340426 |
Isoelectric point | 7.68389892578 |
Runs | 6 |
Runs residual | 0.0386170212766 |
Runs probability | 0.0158246481776 |
Amino acid sequence | MANLSECFIMRCEHHVPGPECFIKKKVPFPPKQCPDLSASSKEKDFS |
Secondary structure | LLLHHHHEEEELLLLLLLLLLEEELLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |