NONHSAT016123
Revision as of 15:54, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT016123 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1191 nt |
Genomic location |
chr10+:104209890..104216056 |
Exon number |
2 |
Exons |
104209890..104210117,104215094..104216056 |
Genome context |
|
Sequence |
000001 AGGAAGGAGG GAGGTCCAGG CCCTTCTTCC ATCCCACGTC CTCCACTTCC CAAGGTGCAA GAAGAAAAGA GGTACAGAAC 000080
000081 ACCCAGAGGT GCCCTCGATT CCGTCTTGCA CTTGCCCTTC TCCCACCGTC CAGCAATAAA GCGAGAGAAA CAAGTGCAGG 000160 000161 AAACTGGCCG GCAGTCATGG GAGAAGCCAA AAAGACAGGT GAGCAGCGCG TCCGCCTCCC GCGCACAGga gttcagtggc 000240 000241 atgaccaggg ctcactgcaa ccttgatctg ggctcaagtg atcctcctac ctcagcttcc tgagtagcta ggaccacagg 000320 000321 tgtgcaccaa ccacacccga ctaatttttg tagagatgag atcccactat gttacccagg ctggtcttga actcctgggc 000400 000401 tcaggtgatc atcctgcctt ggcttcccaa agtactggga ttataggctt gagccaccgt gcctggccTG TGATCAGAAT 000480 000481 TCTCATTTTT TTAGTCACTA Aaaatgctgg ggggcactcc attctccatt atgtgattag ttcacattgc atgcttgtat 000560 000561 caaaacatca tatatacccc acaaatatat acaAAAAACT TTAAAATTTT AAGTATTAAT TGCTCAGGAA AAAATTAAAA 000640 000641 TGCTGGGGTG CTGAAATCTC AAGGGCCCCA TTACAAAACT CCTTAGGAAC CTCGCCCTCT CTCTGCTGTA AGGACTGGTT 000720 000721 CCAGAATGAG AGAATTTAAA AGACATTCcc cccccaaaat gttcataatg tcaccccgga aacctgcgaa tatgttatat 000800 000801 tacatgacca gggagaagta aggttgcaga tggcagtaag gttgctaatg ggctgacctt aagataagga gatgatcctg 000880 000881 gattatctgg gtggacccaa tgtaatcaca agggtcctta actgtggaat agtgaggtgg ctgagtcaga ggcagagtga 000960 000961 tgcaatgact gaaagactta accagccatc accggctttg aatacggaag acggtcatga gccagggaat gcaggcaggc 001040 001041 tctgggagct gaaaaaagca agaaaatgga ttctcccctg gagcctccag aagggatgcg gtcctgccaa ccccttgtca 001120 001121 gtgagccatt tcagatttct gacttccagg actgtaagaa aataaacttg tcttgttttc agccaccaag t |
Predicted Small Protein
Name | NONHSAT016123_smProtein_725:820 |
Length | 32 |
Molecular weight | 3902.7036 |
Aromaticity | 0.129032258065 |
Instability index | 96.9516129032 |
Isoelectric point | 10.6204223633 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.0472354707648 |
Amino acid sequence | MREFKRHSPPKMFIMSPRKPANMLYYMTREK |
Secondary structure | LLLLLLLLLLLLEEELLLLHHHHHHHHHLLL |
PRMN | - |
PiMo | - |