NONHSAT103786

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT103786

Source

NONCODE4.0

Same with

,

Classification

sense

Length

935 nt

Genomic location

chr5+:132209136..132210390

Exon number

2

Exons

132209136..132209781,132210102..132210390

Genome context

Sequence
000001 GGGCGAAAGG GTCCATGCCA GCAACACAAT CACTCAAAGT CCAGATGAGG GATCAGTAAA TACAACGTGC CTGAAAGGTG 000080
000081 GCCCTTGAGC ACATTCCTCC GGTAGACATT AACTTATTAA ATTGATTCTG ATTACAAATA TAAACTTTGC CCCCATCTCA 000160
000161 CCCAGTAACA ATGCAAGAGT TGATGTCAGT CTATAAAAGG AAGTAGGAAC TGTCCCTGGC TTTCAGGCTC CAACATCCTC 000240
000241 CCCCTGTCAA GATGTGGCAC CTCAAACTTT GTGCAGTCCT CATGATCTTC CTGTTGCTGT TGGGCCAGGT AAGGAGGGAA 000320
000321 GGATACTTAT GTGTGTGTGT GGAGTGTGGA GATGATAGTG GTGGTGGAAC TTGAAAGCTA GATTCAGTCC TGAGGAATGG 000400
000401 TTCCTCTGTT CTGAGTCTAC AGCATCTGCG GAATGGAATG ATCACTCTTC CAAGGTGTGC AGCAGGGTGT CAACACTTTC 000480
000481 ATATCTGAAT GTCTTTGCCC TTACAGATAG ATGGCTCCCC AATACCAGAA GTGAGTTCGG CAAAGAGAAG GCCACGGAGA 000560
000561 ATGACCCCAT TTTGGAGAGG GGTTTCCCTC AGGCCTATTG GAGCCTCCTG CCGGGATGAT TCTGAGTGTA TCACAAGGCT 000640
000641 ATGCAGAAAA AGACGCTGTT CCTTAAGTGT GGCCCAGGAA TGATGTACAT ACCAGGGAAA GAAAGGACAG CAGTCACCTC 000720
000721 CGACAATGCT CCGTTCTATG GAATATTGAT TAACTGCATT TTGGCTGGAG ACACCCAAGT GAAGCAATCT TGTATTTTTA 000800
000801 ATATTTAAAG GCAGATGTAC GCTTTAAATT GGTCTCCATT TCTTCTTAGA ATGTTGATAT ATGGATAAGC ATAACTAAAC 000880
000881 TTGTCAATTT AGAGTTTATT TTTCTATGGA TACTATTAAA TGTCTCAAAT TGAAA
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Predicted Small Protein

Name NONHSAT103786_smProtein_488:682
Length 65
Molecular weight 7258.4062
Aromaticity 0.03125
Instability index 102.734375
Isoelectric point 10.6412963867
Runs 9
Runs residual 0.00796875
Runs probability 0.0452903884276
Amino acid sequence MSLPLQIDGSPIPEVSSAKRRPRRMTPFWRGVSLRPIGASCRDDSECITRLCRKRRCSLS
VAQE
Secondary structure LLLLLEELLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLLLLLHHHHHHHHHLLLEELL
LLLL
PRMN -
PiMo -