NONHSAT124619
Revision as of 21:57, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT124619 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
735 nt |
Genomic location |
chr8-:614622..619277 |
Exon number |
2 |
Exons |
614622..614676,618598..619277 |
Genome context |
|
Sequence |
000001 CAGACGTGTA GACGGGCCAG GGGAGGCGTC CCACCAGACA GACGTGTAGA CGGGCCAGGG GAGGCGTCTC ACCAGACAGA 000080
000081 CGTGTAGACG GGCCAGGGGA GGCGTCTCAC CAGACAGACG TGTAGACGGG CCAGGGGAGG CGTCTCACCA GACAGACGTG 000160 000161 TAGACGGGCC AGGGGAGGCG TCTCACCAGA CAGAGGTGTA GACGGGCCAG GGGAGGCGTC TCACCAGACA GAGGTGTAGA 000240 000241 TGGGCCAGGG GAGGCGTCTC ACCAGACAGA GGTGTAGACG GGCCAGGTTT CCACAGTCGT TCATGCAGTG GTATTTTGTG 000320 000321 CTGAGCTCTG TTCTGATTCT CTCTTCTGGT AGCTTCTCAT CTCCCAGATA TGTCATTCTG TGTGGAAGCG TAGGTTTGAG 000400 000401 ACCTTCCTTA AGAGAGGAAA GCTTATCTTT AGTTTATAGA AATAAAAACA AAACTGTATT TCCAAGCAAA ACTGACTTTA 000480 000481 TGTAGGTGTC TCCAGAGATG CAGCTTCAGC TGCCCTCGCA GATGCCGCTG AGGAGCTGCT GGACCGCCTT GCGTCACACA 000560 000561 GCATGCTGCC CTCAGACGTG TCCATCCTGT ACCACATGAA AACGCTGCTG CTCCTGCAAG ATACTGAGAG ATTGAAGCAT 000640 000641 GCTCTGGAAA TGTTCCCAGA ACATTGCACG ATGCCTCCTG ACCATGCCAG AGTAATCTCA GCTTTCTTTA GTTACTGGAT 000720 000721 CACACATATC CTTCC |
Predicted Small Protein
Name | NONHSAT124619_smProtein_239:484 |
Length | 82 |
Molecular weight | 9412.8898 |
Aromaticity | 0.123456790123 |
Instability index | 74.1407407407 |
Isoelectric point | 11.4063110352 |
Runs | 14 |
Runs residual | 0.0306597988717 |
Runs probability | 0.0687031569384 |
Amino acid sequence | MGQGRRLTRQRCRRARFPQSFMQWYFVLSSVLILSSGSFSSPRYVILCGSVGLRPSLREE SLSLVYRNKNKTVFPSKTDFM |
Secondary structure | LLLLLLLLHHHHHHLLLLHHHHHHHLHHHEEEEEELLLLLLLEEEEEEEELLLLLLLLLL LLEEEEELLLLEEELLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooooooooo ooooooooooooooooooooo |