NONHSAT054360

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT054360

Source

NONCODE4.0

Same with

,

Classification

sense

Length

482 nt

Genomic location

chr17+:46048531..46051221

Exon number

2

Exons

46048531..46048675,46050885..46051221

Genome context

Sequence
000001 GAGCTGGGTG TGCTGGGGAC TGGCCGCGGA CCCCTAACCT GTGTCTCCGG TCTCCCTCCG GAAGCGGCTC AACCCAGCCC 000080
000081 ATCGCTCTGG CCCCGTTCTG GCCCTGCAGG GTGGTGGTTG GGACGTTGAA ATGAGCGCGC GAGTGATTGG CTGGTGGACA 000160
000161 GAAGGCACTG CAGCCTGAAA TGGCAGAGTC TGGTGCTGAC GATCCGCGAG AAGATCAATG CTGCCATCCA GGACATGCCA 000240
000241 GAGAGCGAAG AGATCGCCCA GCTGCTGTCT GGGTCCTGTG AGTGCTTAGG GGCTGTCACT GGAGTCCCCT CTTTGCTGAG 000320
000321 GTAGTATGTA TCAGCTGAGC TACTCTCTTG TTATTTAGCC ACCAGGGCTG GCCTTTAGAG AGGGAGCGAT TTTTATTTGA 000400
000401 GGTATAGATG CTGGCTTCTT CCACTATGAA ATGATTTAGG GAAAAGCTAC ACACTAAAGT TACTGGCAGT ATATTATACA 000480
000481 TG
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Predicted Small Protein

Name NONHSAT054360_smProtein_179:280
Length 34
Molecular weight 3732.0695
Aromaticity 0.030303030303
Instability index 48.5727272727
Isoelectric point 5.42510986328
Runs 5
Runs residual 0.0326086956522
Runs probability 0.0111641052818
Amino acid sequence MAESGADDPREDQCCHPGHARERRDRPAAVWVL
Secondary structure LLLLLLLLLLLLLLLLLLLLHHHLLLLLLEEEL
PRMN -
PiMo -