NONHSAT013076

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT013076

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1614 nt

Genomic location

chr10-:45594924..45643337

Exon number

7

Exons

45594924..45595947,45602064..45602178,45602445..45602531,45611386..45611485,45637543..45637602,45642276..45642393,45643252..45643337

Genome context

Sequence
000001 AGCGTGGGTT CTAGAAGCTC ATCTAATGGC ATTACAAGTT TTAAATTCAC CATAGCAGCT TCTTCCTGAA ATCAGAAAGC 000080
000081 TTTTTTTCTG TCTGCAGCTG GAGTGCGATG GCATGATCTC GGCTCACTGC AACCTCTGCC TCCCAGGTTC AAGCGTTTCT 000160
000161 CCTGCCTCAC CCTCCCAAGT AGCTGGGATT GCAGGCATGC ACCACTGTGC CCAGGAAGCT GAGAGTGCTG AGGGCACATC 000240
000241 TGAAACCACT GGAGGTTGGC GACATGGAGG TCAGAACTGA AGAATTTGGA AGTGCTCAAA TTTTTAAATA ACCAGATCGA 000320
000321 GGAGCTGCCA ACACAGATCA GCAGGCTTCA AAAACTCAAA CACCTGAACC TTGGCCACCC TGTGTGCACT CTATCTAAGT 000400
000401 GACAACGGTT TTGAAATCCT GCCACCAGAT ATTGGGAAGC TCACAAAGTT GCAGATAGTA ACTCAGCAAT AGGGATAAAG 000480
000481 ACCTGATCTC ACTGCTTAAG GAAATTGGGG AGCTTACCCA GCTTAAAGAG CTCCACATTC AGAGGAACCG CCTCACTGTT 000560
000561 CTACGCCCAG AACTAGGCAA TGATGGGACC TCTTCTCCTG CATTTGTTAC CCAGATAATT TTGCCTTTGG AGAAGAGAAG 000640
000641 AAAATCACAT TGGTCTGCTC GGAATGCAAC AAAACAAAGT GTTATTGACA CCAAAACCTT ATTTGCACCA ATCCAAACAG 000720
000721 CCTATGGGAC ATATGTCTGC AATGCTGCAC ACACCTGGGG CTTGCCAGCT TAGTGCCCTA CGATATGTGC CAATAATCGA 000800
000801 TAGCATTTTT TACTACAGTA ATTATGAGAA GCATAGTATT TTCTAGCATG CTTGTGAAGA GTGGAAACAA ATATTAATCC 000880
000881 CCTTCAGAGA GTAAAGGACA TTATGAATTG AGAATTTCCT CCCAATTTAT TCTCCAGAAT GAACAGAATT AACAGTGAGT 000960
000961 GGATGTACGT CCAAAATTTC TTCTGTTATA TCTCTTAATC CTTTTCCTGC GGACATCGAG AAACTAAAGA AAAATAACTT 001040
001041 TCTTTACTGA GGCAGGCAAG AAGGAAATCC AGTATTCTTT GTTTGATCAA TTAAGTCTCT GTAAGTGTCT CATTTATCTT 001120
001121 CTCTTTTGTT ATTGTCACTC TGTCAACTGG TTCCCAATTA TTTTATCCAG AGGTTTAAAA CTTTTTTAAA TGTAAACAGT 001200
001201 AGAGAATAGA GGTTAAGTGC TGCACTCTTC ATCACTAGGC TTGGGTTCAA ACCTCACTCT CCCACTCCCT TGTTCTGTGA 001280
001281 CCTTCAGATA CTGATATGGT TTGAAAGGAA AGGAAAGGAA AAAACAGATC AAAATGTTTC AATAATCATG AACGTATATG 001360
001361 TATCTGATAA TGTACCCTTT ATTTATGCTC AATGAGATTT AACATGTTCA TCTCAGAAAG GGATAGATCA AGCTGCAAAA 001440
001441 AGTTTGCATA CATAGAAGAT CTAAATAGCA TGACTAACAA GTTTAAAATA TTAATGTAGA ATCATAAAAA TATAATTTTT 001520
001521 TCAAGCACAC ATATAATATT TGTAAAAATT GACCAGGTAC AAATCACATA GTAATTCTCA ATAAATTTTA GAAAAAGGAA 001600
001601 AAAAAAAAAA AAAA
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Predicted Small Protein

Name NONHSAT013076_smProtein_1391:1498
Length 36
Molecular weight 4296.0465
Aromaticity 0.142857142857
Instability index 56.7685714286
Isoelectric point 9.51275634766
Runs 5
Runs residual 0.0382566585956
Runs probability 0.0246952835189
Amino acid sequence MRFNMFISERDRSSCKKFAYIEDLNSMTNKFKILM
Secondary structure LEELLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHL
PRMN -
PiMo -