NONHSAT022702
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT022702 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1466 nt |
Genomic location |
chr11+:71425473..71455704 |
Exon number |
4 |
Exons |
71425473..71425604,71433219..71433354,71450954..71451054,71454608..71455704 |
Genome context |
|
Sequence |
000001 GAAAATAGTT TCCGATCTTT GGGATTCCCG AGATGGTCCA ATCTGCAAAA AGTTCATTGC CATTTCCATC AAGGACACTG 000080
000081 AGAACAAGAG TCTTATCCGG ATTGGATCCT GGGAATTGAG AAGCTTCAGC AGGGCTTCCG CTGGGACTAG GATCAGGATG 000160 000161 TGGACACCCC CAACCTGGAC CGTCTGGCCG GGGAGGGCGT CAAGGCCAAG TACCTCATGC CGCCCCTTGT CACAATGACC 000240 000241 TCCCCGTCCC ACCTCACTGC CATCCCAGat cttcttggct tagcagctgc agaccgacag tgcccgatcg atcacctcgg 000320 000321 aagcctacag gaccatcaca gacgctctac gttactctca cagtggaaca gcacggctct ttgctgctaa agtcacccag 000400 000401 aacgggagtc attgtgaccc ttacggtccc ccgagaggaa gaatggagac ttttcttaac tgtgtggggc caagagataa 000480 000481 gaccagctct ggctaagcgg tgccaagagt gtgggcggaa gacaaccctc cagggtttgc agtcaaccaa gcccccgtac 000560 000561 ttatagaagt taagcctagg gcccagccgg ttaggcaaaa acaggagccg gtccccagag aagctcttga aggtatccag 000640 000641 gtccatctca agcacctaag aagttttgga attagaggtc cttgtcagtc tccatggaac actcccctcc tgcctgttcc 000720 000721 caagcctaag accaaggact actggccggt acaggatttg cgcttggtta atcaggctac agtgacttta catccagcag 000800 000801 tacctaaccc gtacacattg ctggggttgc tgccagctga ggacagctgc ttcaccttct tggacctgaa agatgctttc 000880 000881 tttagcatca gattatcccg agagccagaa gctgtttgct ttcagtgggc agatccagag tcaggtgtca ctactcagta 000960 000961 cacttggacc gggcttcccc aagggttcaa gaactccccc accatcttcg gggaggcatt gcctcaagac ctccagaagt 001040 001041 ttcccaccag agacctagac tgcgtgttgc tccagtacgt tgatgatctt ttgctgggac accccatggc agtcgggtgc 001120 001121 accaaaggaa cagatgctct actccggcac ctggaggact gtgggtataa gatgtccaag aaaaaagctt agatctgccg 001200 001201 acagcaggta cattacttag gatttactat ccgaaagtgg gagacagcct aggatcagaa agaaacaggt catttgaaat 001280 001281 ctactggagc ctaagaccag aaggcaggtg agagaattct tatgggctgt ggggttttga agactgtaga tcccaaaatt 001360 001361 tgcagtataa gccaagcctt tgtatgaggt cacaaaggga gggggaacgg gaacgttttg aatggggatt ccagcaacag 001440 001441 caaggctttc atgagttaaa ggaaaa |
Predicted Small Protein
Name | NONHSAT022702_smProtein_872:1057 |
Length | 62 |
Molecular weight | 6538.337 |
Aromaticity | 0.0819672131148 |
Instability index | 70.7557377049 |
Isoelectric point | 9.62298583984 |
Runs | 9 |
Runs residual | 0.00527605049934 |
Runs probability | 0.0369192722133 |
Amino acid sequence | MLSLASDYPESQKLFAFSGQIQSQVSLLSTLGPGFPKGSRTPPPSSGRHCLKTSRSFPPE T |
Secondary structure | LLLLLLLLLHHHHHHHHLLLLHHHHLHHHLLLLLLLLLLLLLLLLLLLEEELLLLLLLLL L |
PRMN | - |
PiMo | - |