NONHSAT024036
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT024036 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1882 nt |
Genomic location |
chr11-:108384134..108408914 |
Exon number |
4 |
Exons |
108384134..108385602,108388962..108389100,108398863..108398911,108408690..108408914 |
Genome context |
|
Sequence |
000001 CACTGTCGCT GAGAAACAAG AGGCAGCAAG CAGCTGGTGG GTTGTGTGAT GAGGCTGCTG GATTTAACAG ACCACTGTCC 000080
000081 TCCCCTCTTG GGTGAATGGA GGGTTTTTCA CTTCCAGCTT TCACCCGAGG CTGTTTTTGT CTGATGAAAG AAAGAGCAGA 000160 000161 CCACAATGTA GATTTATGTG ACTGTAGCTA CCAGAGTCAC TAGCAAGGAA ATACTCTTCA AATAGATGTG ATGGCCATGC 000240 000241 AGGACCTCCT ATGCCTGTGA GGGGAGCTGC TGTGCAGGCA AAAATATACA ATTCACCTCT GGAAAATCAT CTAGTTGACA 000320 000321 GTACATTTGT CCCAAAGCCA GCAGTCATGA GGGAGGAGAG TGGCATGCCT CCACCGTGGG ATGCTTCACT GCTGGAGAAT 000400 000401 GAGTTTTTCC AAGTTTTAGA TGACTTGGAT AGCAAATTGG CTCAGGAACA GTCTGCAAGC TCAGTGAATA CCAGAACACC 000480 000481 CCTCAACTAT GGATCAAGAA CACAGTTCGG TCACTTTTAT TCCAGTGGTA ACAGACATGG TAATATCACA GAAAGGCACA 000560 000561 AAAAACACTA TAATGAAACT TCCAATATGT CTATCTATGA CATCCTAAGA CCAGGAACTC CTAGGGAAGG TTTTAAAACC 000640 000641 TTTTCTCCTA GGACAAGCAC AATTTATGAT ATGTATAGGA CAAGGGAGCC CAGAGTCTTT AAAGAAGATT ATGTGCAAAA 000720 000721 GAATACTTTT GGCAGTACTT CGCTGTGTTT TGACAGCAGG CAACGGTCGG CCTTACCAGC CACAGGGCAT TTCACAGCAA 000800 000801 GAAGCTTACA TTTTCCAGCC ACAACTCAGA GCAAGAGTGG GTTTATACCA CCAAGGCACC AGCAGAGTCC AAAGAGAACT 000880 000881 CCTTTATCAT CCATCATATG GAACAGATCA GATTCCTCTA GAGACAGGGA GAACCAGGAA GAGTTCCTGA GGGCACCATC 000960 000961 ACCAATGGAA ATTGATCCCG CTGACAAGTA TGTGTATCCC AGGGGTTTTC AGGAGAATAA GAGATATGAA TCGTACCATT 001040 001041 CACAGAATGT TTACCAACGT GTTAGTTTAA ATGCTCCCAT GGAGAATGCA ATGAGTCCCG ACACTTTTGA GAACTCAGAG 001120 001121 AACATGCCAT TCTACCATCA AAGCAACACA TTTACCAGAT CTTTCTTCAG CAATACCTTT GGACGAAGCG GAGAACAGAG 001200 001201 GAGATTTGGA CAAGGTCCTT TTTGGGGCCA AGAGAAAGGA CATTCTTTCT GGTCTGACTT TCATCGAAGC AGGAAATCAT 001280 001281 TCAGTTCTTC TGACAGAGAC TTTGAAATGA TTTCCATGGA AGCAAATAGT GTATCAGCCA TTCATGGCCA TAATGTTTCT 001360 001361 TCTGAACACT GGGAATCATT TTCTTCTGGT TATGGAACAG ATGTTTCCAG AGGCCAAGAA GAGCCACATC CTTGGCAGTT 001440 001441 TGATTTTCAG AGATCCACAC TGGATAGCAT GGTGGTATCA CATGGTAATG AGACCCAGTT GACTCCTCAT TTTGGCACAC 001520 001521 CAAATGTTTG CTCCATGACT GGTTCAAGCT ATCACGTCAA ATCTAGTGAG TTGGTAAGTC AACAGGACAG TTCTCCTGTA 001600 001601 GAAGTACATA TAAACAAAGA AGCTTCCTCA TTTGGAATTG CTCAGACTCT AGCATCCTCA TTCAAAACTT CCTTTTCCCA 001680 001681 GATTTCTGAT GACAGAAGGA ATCCTCAGAG TCCCAACTTG CAGAATCCCA CAGTCACTTT GCAGAAAATT TTTCCAAATA 001760 001761 AGCCTGCCTC TCATCCAATG AGAAGCCATA CAGAAGTCAC TGTGACCAGC AGCAATTCAG TTGACTCTCT GCCTCTTGCC 001840 001841 AAAAGCCAGC CCAATATCTT GGTCACAGAA GTAAATAATG AG |
Predicted Small Protein
Name | NONHSAT024036_smProtein_665:949 |
Length | 95 |
Molecular weight | 10588.1812 |
Aromaticity | 0.063829787234 |
Instability index | 42.1021276596 |
Isoelectric point | 9.94720458984 |
Runs | 16 |
Runs residual | 0.0413968547641 |
Runs probability | 0.0125033121357 |
Amino acid sequence | MICIGQGSPESLKKIMCKRILLAVLRCVLTAGNGRPYQPQGISQQEAYIFQPQLRARVGL YHQGTSRVQRELLYHPSYGTDQIPLETGRTRKSS |
Secondary structure | LEEELLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLHHHHEEELHHHHEEELE EELLLLHHHHHHEELLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |