NONHSAT035019
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT035019 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1855 nt |
Genomic location |
chr13+:103472737..103492513 |
Exon number |
7 |
Exons |
103472737..103473482,103474093..103474197,103474415..103474509,103483915..103484047,103486816..103486902,103490993..103491089,103491922..103492513 |
Genome context |
|
Sequence |
000001 CGTATTTCTT CTTAAAACAG AATAAATAAA TAGTCTGTCT CTTTCTCCTT CTGTTCACAT TTGCCCCAGT TTCTTCTCTT 000080
000081 GAATCATGAC AGTTTGGAAA ATTGTCTGGA TTGCTTAGTG CCACTGAATC ATGCCATGGA AGGATTTTGT ATTTCACTTT 000160 000161 TAAACTTCTC TGTGACAGGA GAAGCACTGC TTCATGGCTT CTTGCCCAAG GATTTTAGAT GGACACAGTG GGTAATAAAT 000240 000241 GGATGAATTT TTGTTTGGGT TGAAGAATCT CTCTGAGAAG TTGACACGTG GGGGCAATGG TTTGTTTCTC TTGTATTTCT 000320 000321 GAAGTTGCAA ATAATCATGT AAGCAGTTCA ACCAGGAGTT TACACCAAAC TTTTAATAGG CGATATATCA TTATTTTTTT 000400 000401 TCCCATTGGT TTGGATAACA TCCACTTTAA CTGGCAGTTA GTCATACTTA GCTATTTTTG TTAAAGCAGG TGATTTATTG 000480 000481 TTATTTTATA TTTATGACAT GATTAATAAG TGAATATGGA AGATTTTACA TTGACTTAGG GGATCAAAGT TTTCATTATA 000560 000561 TTAACACCTT TAATTGCCAT GAGTTTTCTA TTTCTAGCAT GCATATTTTG TGTTCATTCA AGTGAAGAAA ACAGTCTTTT 000640 000641 GTGTTCTCAG GTACTGCATA AGCCGACCAC AGTATAAGAC TTCTTGTGGC ATCTCTTCAT TAATTTCTTG TTGGAATTTC 000720 000721 TTATACAGCA CAATGGGAGC TGGAAACCTT CCACCTATTA CCCAAGAAGA AGCTTTACAT ATTCTGGGCT TTCAACCTCC 000800 000801 ATTTGAAGAT ATTAGGTTTG GTCCTTTCAC GGGGAATACA ACACTTATGA GGTGGTTTAG ACAAATTAAT GACCACTTCC 000880 000881 ATGTAAAAGG ATGCTCTTAT GTTCTATATA AGCCTCATGG GAAGAATAAA ACAGCAGGAG AAACTGCTTC AGGGGCCCTG 000960 000961 TCAAAGTTAA CCCGTGGATT GAAAGATGAA TCGCTGGCTT ATATCTATCA TTGCCAAAAT CATTATTTTT GTCCAATTGG 001040 001041 CTTCGAAGCA ACCCCTGTTA AAGCTAATAA AGCATTCAGC AGGGGACCTC TCTCACCACA GGAAGTTGAA TATTGGATCT 001120 001121 TAATTGGAGA ATCAAGTAGA AAACATCCTG CCATTCACTG TAAAAAATGG GCAGATATTG TTACTGATCT AAACACTCAA 001200 001201 AATCCAGAAT ACCTGGATAT CCGGCACTTA GAGAGGGGAC TGCAGTATAG AAAAACAAAG AAGGTTGGGG GAAATTTGCA 001280 001281 TTGCATCATA GCATTCCAGA GACTTAACTG GCAAAGATTT GGCCTTTGGA ACTTTCCATT TGGAACCATT AGACAAGAAT 001360 001361 CACAACCTCC AACACATGCC CAGGGAATTG CCAAATCTGA GAGTGAAGAC AATATTTCCA AGAAGCAGCA TGGGCGTCTG 001440 001441 GGCCGGTCTT TCAGTGCTAG TTTCCATCAG GACTCGGCAT GGAAAAAGAT GTCTAGTATC CATGAGAGAA GGAACAGTGG 001520 001521 TTACCAGGGT TACAGTGATT ACGATGGGAA TGATTGACTA TGCTTGCTAC TGAACAGCTG GCATTATATA TGAAACTGCT 001600 001601 ATATACAGGA CTGTATAAAG ACAGTAGAAG ATTTTAGTAA GCCTACATTA AATAGGAGCA GATCTTGTGG TATAAAAAAT 001680 001681 AACCTTGTAG TTCTCCAGAT ACTAAGCTTG TATATGATTA TGGTGGGTGA TTTCAGATAT ATAAGCAGAT AAGCACAGAT 001760 001761 TATTGTCCTT TCAAGTTAAG AGTATATAAT CTGGACAGAA AATTTCACAA AATTCAATAA AATTACAACT GTTGTCTAAA 001840 001841 TAAGTGAAAC ACAAA |
Predicted Small Protein
Name | NONHSAT035019_smProtein_296:463 |
Length | 56 |
Molecular weight | 6483.4378 |
Aromaticity | 0.163636363636 |
Instability index | 58.9927272727 |
Isoelectric point | 7.78912353516 |
Runs | 10 |
Runs residual | 0.030303030303 |
Runs probability | 0.0590001766472 |
Amino acid sequence | MVCFSCISEVANNHVSSSTRSLHQTFNRRYIIIFFPIGLDNIHFNWQLVILSYFC |
Secondary structure | LEEEEHHHHHHLLLLLLLHHHHHHHHLLLEEEEEEELLLLLLEEEEEEEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTooo |