NONHSAT062906
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT062906 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
892 nt |
Genomic location |
chr19+:17733256..17734147 |
Exon number |
1 |
Exons |
17733256..17734147 |
Genome context |
|
Sequence |
000001 TTTATTCCCC CTGCCTACAA ATGCATTGCC TGTGGTTGGG TATGCTGCCA CCAAGTGGTT ATAGCCAAAG ACCCAGGCTG 000080
000081 CAGCTACCAG GAAGTAAGAG CCCTTGTAAA CTTTTAACAA AGTGAAATCT TGTAACAGCC TTGTCTTGCC CACAAAGGGA 000160 000161 AAATCTGAAG TTGTTTTGTC TCTGCTCTTA CACATGTCTG CATATCACCA CCACCACCAC CACCACCACC ACCACCATTA 000240 000241 GCTCTGCCTC TGGGCCGGTC ACTGAGAGTG CAGTGGCGCG ATCTCGGCTC ACTGCAACCT CTGCTTCCTG GGTTCAGGCA 000320 000321 ATACTGAGAT GAGTATTTTA ATGCATCATG CCATTTGGTT CTTAGAACTA CCCTCAGGGA GGTGATGCAA TGAGCCCCAT 000400 000401 TTTCCAGACA AGGAAACAGA GGCTGGGAGG TCAAGTGACC TCCCAAGGTC ACAGAGAGAG ACAGTGGCTG GGCTAGGATT 000480 000481 TGACCCCAAG TCTACCTGAC ATCAAAGCCA TGACAAAAGT CTCCCACTTG GGCACCTGGG TGTATGTCTG GGATTGGTGT 000560 000561 GTGTCGGTGT GGATGGCGGG AGTTGGGTAG ACAGGGTGGT GGGGTACCAA GGAATGGTCT GGAGCATGGA ATTTCAGAGG 000640 000641 AATCAGAAGT AGAGACCCTC ATGGTGAGGA CCTGCATTCT GGGAAGCTGC TGACAGTTCA GAGCCCAAAG AGGAGGTCAG 000720 000721 AGGAATCCTG GGGTTGATCC TCTTTCTAGC TTCAGGGCGT CTGGTGACAT CTGGGCACGG GAGCAAGGTT GGATTCTACC 000800 000801 CTTAGACGGC AGGTCCGCTG CGAAGGAGGA GCTGGGCTTG GGGTTTGGGA GTGGGTAGTG GGGCTCCTCT GGACTTCAGT 000880 000881 GGGACAGGGA GG |
Predicted Small Protein
Name | NONHSAT062906_smProtein_20:124 |
Length | 35 |
Molecular weight | 3824.6084 |
Aromaticity | 0.0588235294118 |
Instability index | 89.8823529412 |
Isoelectric point | 10.0602416992 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.0 |
Amino acid sequence | MHCLWLGMLPPSGYSQRPRLQLPGSKSPCKLLTK |
Secondary structure | LLEEELLLLLLLLLLLLLLLLLLLLLLLHHHLLL |
PRMN | - |
PiMo | - |