NONHSAT072817

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT072817

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

2302 nt

Genomic location

chr2-:101867043..101869344

Exon number

1

Exons

101867043..101869344

Genome context

Sequence
000001 GTTACACGAC AGCGTCGCAA ACAAAACACG TCGGGGAAAC CAGACCGCCG CGGAGAGGGA CAGCGCCCAG CGAAAGCGAG 000080
000081 GCTGATGGAG CGAAGCCAGG AAGAGGATGC GGAGACgcgg ggtaggcggg gcgaattggc aggaagcggg ggcggggccc 000160
000161 gggaagggag gggaggggcg gggcgaggtc gggctggTGG CGTTCAGGGT TAGGTCTGCC GAGGTCCCGC GGCAGGAGAG 000240
000241 CCCGGGGACT GCATGCGTCT GCGCAGCTGC GAGGTTAAGC CGCCCTTTGG CGGTCCCCAG GACGGTTCCT GGTGCCAGAC 000320
000321 GGTCCCAGTA AGTGCTGTCT ACGTTATTAT TTGGAAGAAT GCACCTCAGA TGTTAACTAT TTTCTTAATA TAACATCCGT 000400
000401 AAGTATTCGT CGTAAAAAGT ATTGTAAATG CAGgccgggc gtggtggcgc gtgcctgtaa tcccagcact ttgagagtcc 000480
000481 taggcgggag ggtcgcttga gcccgggagt cccaggctgc agtgagctgt gatcaccact gcattgcagc ccgggcgctc 000560
000561 tgtctcagaa aCATTTTTTT TAATTTAGTA AATGCAAATA TACCACACAT TTCACataac cacggttaat ttctagtctt 000640
000641 acactcattg cagaaatgga atcatactgc actatgagct tttttgtaca tggttttttc tcttaacatg atttcGAGAA 000720
000721 CATGTCTCCA GTTAATATTC ATTTACAAAA TTGTTTGCTG TGCCACGTTT TACTTAGATT GCCCTAGGGC ACTTATCCTG 000800
000801 GGCActtagc tgtgcattag aaacccacgg ggagacgtta caaataccta gttccacccc cagagatgct gattgagata 000880
000881 ttaataaacc ccacctcttc aggtgagtct gaggtgtagt ctgggctgag aaccacCAGG TGGCATTTCC CAGACTTGCC 000960
000961 CGGTCCCTAA ACCTACAGAA ACGTACGCGT ATTTCGCCAG TGATTACCAC CAGCGATTCT AATTATCTAG TTAAGAGCCA 001040
001041 CCTCAATTCt tttttaaaac atatttttat tttattttat GTGTTTTTGG GGAGAAAGAT ATTTTATGTA AAAAAAATTT 001120
001121 TTTTCATCTT TTTAAAACtt gtatttcagt agttttgggg gtacaggtgg tttttggtta catggataag tttttagtgg 001200
001201 tgatttctga gactttggtg cacccgtcac cagagcagtg tacgctgtac ctgtcaggcc tctgagccca agcctgcaca 001280
001281 tatacatcca catggcctga agtaactgaa gaatcacaaa agaagtgcaa atggctggtt cctgccttaa ctgatgacat 001360
001361 taccttgtga aatcccttct cctggctcag aagctccccc gctgagcacc ttatgacccc cgccccggcc tgccagagaa 001440
001441 caaccccctt tgactgtaat tttccactac ccacccaaat cctataagat ggccccaccc ctctctcact tccctgactc 001520
001521 ttttcagact cagcccgcct gcacccaggt gattaaaaag ctttattgct cacacagagc ctgtttggtg gtctccacac 001600
001601 ggacgcgcgt gacagtaccc aaaatatagt cttttatccc tcagccctgt cccacgtata ccccctccca ccccagagtc 001680
001681 ctcaaagtcc attatatcat tcttatgtct ttgcatcctc ataacttagc tcccacttag aagtgtaata tttggtttGC 001760
001761 TACCTCAAtt cttatgaaaa atttaaggaa gagaaattgc tgggtcaaca ggtgtgatat ctactgaatt ttaaaggctt 001840
001841 cttcaattta ctgctaaatt gcacttcaga aagatcctgc caattaacgt tcctaacagc agCAGATATA ATGTGGTAAC 001920
001921 TTGGGGAACT GATTCAAATT AGCTCAAAAG TACTCTCATA AATTTTTTAT TATAGggcct gggcaaggtg gcttatgcct 002000
002001 gtaatcccag cactttagga gaccgaggca ggtggatcac ttgaggccag gagtttgaga ccagcctggc cgtggtgaaa 002080
002081 ccccgaatct actaaaaata taaaaattgg ccgagcatgg cggctcatgc ctgtaatccc agctacttgg gaggatgagg 002160
002161 cagaagaatg gcttgaacct gggaggtgga ggttgcagtg agccgagatc tcaccactgc actccagcct gggcgacaga 002240
002241 gtgagactgt ctcaaaaaaa aaTTTTTGTT ATTATAATAA ACTGTATTTT GTGCAAGCCA TT
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Predicted Small Protein

Name NONHSAT072817_smProtein_689:808
Length 40
Molecular weight 4475.4938
Aromaticity 0.128205128205
Instability index 40.9156410256
Isoelectric point 8.48822021484
Runs 10
Runs residual 0.0876696832579
Runs probability 0.00653594771241
Amino acid sequence MVFSLNMISRTCLQLIFIYKIVCCATFYLDCPRALILGT
Secondary structure LEELHHHHHHHHHHHHHHHHEEEELEEELLLLHHHHLLL
PRMN LLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL
PiMo oooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiii