NONHSAT091480
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT091480 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1943 nt |
Genomic location |
chr3+:121468132..121470030 |
Exon number |
1 |
Exons |
121468132..121470030 |
Genome context |
|
Sequence |
000001 CCGCTCCAGG AACAAGGCCG TGCGGACAGG ACTGACCTAG GCGCTTTTCC CCGTCGCTCC CAGAGGAGAA ACGTACCGGG 000080
000081 GAGGGGACAG ACCGTGAGCA AGTGGTCCAA GTCTGCGCAG GGTGACCCCG AAGGCCCACC GGAGAGGCCG AGGCTTGTGG 000160 000161 GCTACTAGAA CTAGGCCTGG TAGGTGAAGG AGGCGGGTGA AGGGCCGGAT CCAGGACTGA ATCCGGGAGA GGCGGGGCGA 000240 000241 GGAGGGGACT CCGGTGTAGC TGCTTGGGCA GCTCCCGCGG CCCCTCTGGC GGGGGTGACC GTTATTGGAC TCGCAGAGGG 000320 000321 AAGAGTTGGG TAGCGTCCCC TACTCACCTA GAAGCGCTGC CGCCTGAGGC TCCAGCTGCC CCCCTCCCAA TTCAAGCCAC 000400 000401 GTCAGCTCGG GAAGCCCGTA CGCGACACCT TCCACCGCCG CGCCCCGCCA GGGACTCAGC CACTAGCAGT TGGGACGGAA 000480 000481 GATGGGATTA AGACACCGAC CAATCAGGAC TATCGGCAGG ACGTTACCAG GGAGACCAGG CACACCTTGT TTGTTACCAA 000560 000561 CCTATCAACA ATGACGGAAA CCAATCAACG ACAGAAGATG CTCCGCTTCC TCAAAGAAAC AGCCAATGGA CCCTAAAGAG 000640 000641 TGAATGAGGG GAGTGATTAG ACCCGAGTAG GTGCCCCGGA ACAAGATCTG GGGAGGGACA GGAAGTGTCG AGTGGGCGGG 000720 000721 CGTTCTGGGA AAGGTCAGAT GTTCTCAGTG TGAGGTGGTT ATGCTGGCTT CCTCCAATTC CTCCTCTTCG TCGGCTGTGA 000800 000801 CTGACCGAGA CAGCGGCTTG GGCTTCGGCA GAGACTTGAG ACTGCGGGCA CCCGCTGCCA TTAGGATTGT TGAATGAGCT 000880 000881 GTGAGAAGGG AGTGGGGGAT ATGGGACTCT TAGATTGAAA AAATACTGGA GCCTCTTAGT TGTTCGTCTA GTTTCACCTT 000960 000961 TTGATTTTGT TGATGAAAAA TAATTAACCA CAGAAGTAAC TTGCCCAAAG TCAAACAGCG ACTTAGTGAT GGAACTCGGA 001040 001041 CTAGAACCCG GTGTCAGTAT GAAAGAGGAT CAGCAATGTC TGTAAGGACA TGATTGTGAG AGAGAGAGTA GTGAATACTA 001120 001121 GGAAGGTGCC TCTTACAAAG TGGAGCCTAA GCCAGGACCT AAGCAAAGAT TGAGAGTTGA GGGCTCAGGC TCTGCAATGA 001200 001201 GTGTCAGTGA GGAGCTCCAG CAAAAGACTG AAATCACTCA TGCTTTCCTT AAACCCCTAA GGAAAGGGAA GGAAAGTAGC 001280 001281 CAGCTCCCAA TGAGCTGTCA TTTCAGGCAC TCTCTTGGCA ATAAGAGTAA TGTTAGTTTG AATTTATTGA ATCTTGCTGT 001360 001361 GCACTCAGCT GGCCCATTGT ATGTATACTC ATCTTAATGA TTACATAACT TCACAATTCA AACATCAGCT AAGTAAGGCC 001440 001441 TTTCCTGGCT GCCCATCTTA CGGAACTGGA GGTCATTATT CTAAGTGAAA TAAGTCTGGC ACAGAAAGAC AAATATCCCA 001520 001521 TGGTCTCACT CATGTGGGAG CTTAAAAAGT TGATCTCATG GAGTAGAGAT AAGTACCAGA GGCTGGGAAG GTGGAGTTGG 001600 001601 GGGAGGGAGG GAAGAGATTG GTTAATGGGT ACAAACGTAG ATAGAAGGAA TAAGTTCAAG TGTTTGATAG CACAGTAGGG 001680 001681 TGACTATAGT TAACAATATG TTATATATTT CAAAATAACT AGGAGATTAG AAATGTTCCA AACACAAAAA TGATAAATGT 001760 001761 TTGAGGTGAT AGATATCCTA AACACCCTGA TTTGATCATT ACACATTGTA TGCATATATC AAACTACCAC ACCCCATAAA 001840 001841 TATGTACAAA TATGTATCAA TACAAACATA AATAAAATTG CAATTTCCTG CATGCACTAA AAAAAAAAAA AAAAAAAAAA 001920 001921 AAAAAAAAAA AAAAAAAAAA AAA |
Predicted Small Protein
Name | NONHSAT091480_smProtein_1196:1396 |
Length | 67 |
Molecular weight | 7340.3372 |
Aromaticity | 0.0606060606061 |
Instability index | 68.4651515152 |
Isoelectric point | 9.36016845703 |
Runs | 11 |
Runs residual | 0.0160587915079 |
Runs probability | 0.0441377206083 |
Amino acid sequence | MSVSEELQQKTEITHAFLKPLRKGKESSQLPMSCHFRHSLGNKSNVSLNLLNLAVHSAGP LYVYSS |
Secondary structure | LLLLHHHHHHHHHHHHHHLHHHLLLLLLLLLLEEEEELLLLLLLHHHHHHHHHHHHHLLL EEEELL |
PRMN | - |
PiMo | - |