NONHSAT100777
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT100777 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
978 nt |
Genomic location |
chr5-:25413377..25423011 |
Exon number |
3 |
Exons |
25413377..25413953,25415684..25415911,25422839..25423011 |
Genome context |
|
Sequence |
000001 TAAAAATATT GCAGAAGGTA GATAATTCCA ACATTTGTGT TTTTTAGAAA TTACTTTTTT TCAAGAATGA GTTCATGTCC 000080
000081 TTTGCAGGGA CATGGATGAA GCTGGAAGGC ACCATTCTCA GCAAACTAAC ACAGGAACAG AAAACCAAAC ACCGCATGTT 000160 000161 TTCACTCATA AATAGGTGTC CGCATTTGGT ACAACGTTCG TCAAAGAGGA TGAGGTTACC GGGATTGTCA CTGATGTGTT 000240 000241 TAAATGACTG CGCCAGCCTC CAGAGAATAA GATCTGTATT CATTGATTCA TTTAACCAAT ATTCAGGTGA CTACCACATG 000320 000321 CAATACCACA CTCTTATCTA GGCAACTTGA GTCACTGAGC TCAGTCCAGA ATCTTGATGA CTGAATGGAA ACACCAAGGA 000400 000401 GAATACATGA AGCCGGGCAC AGTGGCTCAC ACCTGTAATC CCAGCACTTT GGAAGGCCGA GGCGGGCAGA TCACCTGAGG 000480 000481 TCAGGAGTTC AAGACCAGCC TGGGCAACAT GGAGAAACCC CGTCTCTACT AAAAATACAA AAATTAGCTG GGTGTGATGG 000560 000561 CACGAGCCTG TAATCCCAGC TACCTGGGAG GCTGAGGCAT GAAAATCTCT TGAACCTGGG AGGGGAGATC GCGCCACTGC 000640 000641 CCTCCAACTT GGGTGACAGA GTGAGGCTCC ATCTCAAAAA AAAGAGTACA TGAAAAGTTC CCAAATCATA AATCAAAAAA 000720 000721 AATTGTTTGA AAGTTTATTT ACAACCAACA TCTCATTTCC CCGTAAGTCT CCATTTCTTC TCATATGCAC TGCAGATAAC 000800 000801 AAAACCATTG TAAACTCTAT TTTTCTCCCC TTCTCACTGT GATGTTTCAT AAGTAAAACC TAGATTTTCC CAGTGCAGAC 000880 000881 CTCCATTTTA CTCTTGAAGA CATAGGTCTG GTAACTTGTG GCTAGGAAAA TGAGGAATAG AAAAATAAAC ATTTTGATGC 000960 000961 CTGATTGTTT GATATTTT |
Predicted Small Protein
Name | NONHSAT100777_smProtein_74:340 |
Length | 89 |
Molecular weight | 10326.004 |
Aromaticity | 0.0909090909091 |
Instability index | 43.7147727273 |
Isoelectric point | 9.85150146484 |
Runs | 12 |
Runs residual | 0.005 |
Runs probability | 0.0438673968086 |
Amino acid sequence | MSFAGTWMKLEGTILSKLTQEQKTKHRMFSLINRCPHLVQRSSKRMRLPGLSLMCLNDCA SLQRIRSVFIDSFNQYSGDYHMQYHTLI |
Secondary structure | LLLLLEEEHHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHLLLLLLLLLLLLLHHHHLLHH HHHHHHHHHHHHHHHLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |