NONHSAT101306
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101306 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
591 nt |
Genomic location |
chr5-:43293836..43294954 |
Exon number |
2 |
Exons |
43293836..43294264,43294793..43294954 |
Genome context |
|
Sequence |
000001 ATTAGAAGAC ACCTACTTTG ATAGAGATGT GGAGAAGGCA TTTATGAAGG CTAGCTCTGA ACTCTTCAGT CAGAAAACAA 000080
000081 AGGCATCTTT ACTTGTATCA AATCAAAATG GAAATATGTA CACATCTTCA GTATATGGTT CCCTTGCATC TGTTCTAGCA 000160 000161 CAGTACTCAC CTCAGCAATT AGCAGGGAAG AGAATTGGAG TGTTTTCTTA TGGTTCTGGT TTGGCTGCCA CTCTGTACTC 000240 000241 TCTTAAAGTC ACACAAGATG CTACACCGGG TAAGTGCTGA ATCTTTCAAC AAGAATGTAT TGAGAACTGA GTccaggcac 000320 000321 agtggctcac acccgtaatc ccagcagttt gggaggccga ggcgggcaga tcacctgagg tcaggagttc gagaccagtc 000400 000401 tggctaacat ggctgaaacc ccatctctac taaaaataca aaaattagcc aggtgaggtg gtgcatgcct gtagtcctag 000480 000481 ctacttggga ggctgaagta ggagaatcac ttgaatccag gagagggagg ttgtggtgag ccaagatcac accactgtgc 000560 000561 tccagcctgg gtgacagagc gagactctgt c |
Predicted Small Protein
Name | NONHSAT101306_smProtein_209:337 |
Length | 43 |
Molecular weight | 4840.6567 |
Aromaticity | 0.047619047619 |
Instability index | 68.8928571429 |
Isoelectric point | 10.2951049805 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0357458298634 |
Amino acid sequence | MVLVWLPLCTLLKSHKMLHRVSAESFNKNVLRTESRHSGSHP |
Secondary structure | LEEEELLHHHHHHHHHHHHHHHHHHHLLLHHHHHHLLLLLLL |
PRMN | - |
PiMo | - |