NONHSAT101952
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101952 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1599 nt |
Genomic location |
chr5-:69351645..69353243 |
Exon number |
1 |
Exons |
69351645..69353243 |
Genome context |
|
Sequence |
000001 AGTAATTAAA AGTGTAGTAC TGACATCAAT ATACACTAAT AGACAATGTA ACAGAATTGA GAGTCAGAAA TAGCCCTGTG 000080
000081 ATATATGTGA CTGATTTTAA CTAAAGTTAC AAATGTGGTT TAATAGAGAA AGCATAGTAG TTTCAAGAAA TGGTGGTAAA 000160 000161 ACTATTGGAA ATCCTTATGC AAAAACAAAC CAAATTTCCA CCTACACTGA GCCACATATA AGAATTAATA CAAAATGGAT 000240 000241 TACAGACCTA AGTGTAAAAC TAAAACTCTA AACTGTGTAA AAAAAAAAAA GAGAGAAAAA TCTGTGATCA TGGATTGCCT 000320 000321 ATAACAAAAG AACAAACTGA AATGGCCTTG TTGCCTGGGG TGGCACCCGA GGTTCTTGGT CTCACGCTGA GGAAATCAAG 000400 000401 GACGCTGACA CACCAAGGGT GTGAGGCTAG AGCAGAAGTT TAATAGGCAA AAGAAAGAGA CTAGCTCTCT CCTGCAGAGA 000480 000481 GAGGTCCTGA AAAGAGTTCC CATTCCACAG TGAAATGCAA GCATTTTTAT AAATGAGCTA ATGGGAAGGG GGTAGCTTAT 000560 000561 CTACACATAG GGAGCAAAAA ACCAGTTAGG ACCAGGTGTT GCCATCTGCA CAGAGCGTGA ATCTCTGGCA TCCCCCACCC 000640 000641 CAACCTTTTA TTATGCAGGC AGGTCCTTGG CCTGAGCTAC TCCACATTGC TTATCTCTTT CCTATTGTGC ATGTGCTAAA 000720 000721 TAAGGGGAGG TGGAGCCACC ATGGTGGACA TGCCTGGCCC CAGGTACCCC TTTCTCTCCG TGCAGCTGCA GGCAACCCCA 000800 000801 ACAACTCACA ACATGCAAGC TTCCAGCTTC CTTATCTGAG TATGTACTAA GGTCCACTGT GTTTACTTCA CATACTGTGT 000880 000881 TTACTTCACA TACCCACCTT ACGTATGTGA AGCTTGCTGA TTACCCAGGA AGCTCCCCCT CTGTGCCAGA GCTGCTTCCT 000960 000961 TATACATGTT TACAGCCCGA TCTTCCAGGC TGCTCCTTGT TAGAAGAGAA GTGATTTCTT GGGCTGCTTT TTGTTAGAAG 001040 001041 GGAAGTTCTA CCGAGGACTC TGTCTAACTA TCGGCTTACC TAGTCTTTTT TTACCTCCTC TCTCAAAACC ATCAAAGAAA 001120 001121 AAACTGAAAA ATTAGATTTC AGCAAAATTA AGATTTTCTG TTCTTAAAAA GACGTTGTTA ACAAAATGAA AAACCAAAGT 001200 001201 GTAAACCGGG AGAAAATACA TGCAAGTTAC CTATCTGATA AAGATATTGT ACCCAGCAAA CATGAAGAAC TCTCAAACCT 001280 001281 CAACAACAAA AAAATTCAAT TAAAAGATGG GTAAGTTGGC CGGGTGCAGT GGCTCATACT TGCAATCCCA ATCTTTGGGA 001360 001361 GGCTGAGGCA GGAAGATTGC TTGAGCCCAG GAGTTCACGA CAAGCCCAGG CAACATAATG AGACCTTGTT TCTACAAAAT 001440 001441 TTTAAAAAAT TAGCCAGGCA TTGTGGCGTG TGCTCGTAAT TTCAGCTACT CAGAAGGCTG AGACAAGAAG ACTGAGCGCA 001520 001521 GGAGGTGGAG GCTGCAGTAG GCTGTGTGAT TGCACCACTG CACAACAGCC TGGGTGACAG AGTGAGACAC TGTCTCCAA |
Predicted Small Protein
Name | NONHSAT101952_smProtein_341:442 |
Length | 34 |
Molecular weight | 3518.1176 |
Aromaticity | 0.0 |
Instability index | 42.0484848485 |
Isoelectric point | 8.00030517578 |
Runs | 7 |
Runs residual | 0.0279973649539 |
Runs probability | 0.0312917959977 |
Amino acid sequence | MALLPGVAPEVLGLTLRKSRTLTHQGCEARAEV |
Secondary structure | LLLLLLLLHHHHLLLLLLLLEELLLLEEEEEEL |
PRMN | - |
PiMo | - |