NONHSAT102846
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT102846 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
884 nt |
Genomic location |
chr5-:94848836..94852472 |
Exon number |
4 |
Exons |
94848836..94849349,94850559..94850627,94852057..94852113,94852229..94852472 |
Genome context |
|
Sequence |
000001 AATTTAACTT CTTTTCAGTG TCTGAAAAAA GCAGTGAGAC TCGACAGTAA TAATCACTTA TACTGGAATG CTCTTGGTGT 000080
000081 GGTTGCATGT TACAGTGGTG AGAATTGAGT AACACTTCAA TATTTTTAGA AGATTGTGTA TTTCAAACAA AGTTCAGTTT 000160 000161 CATCAGGTTT TGTATTTTTC AGGTATTGGA AATTATGCCC TTGCTCAGCA CTGTTTCATC AAATCAATCC AGTCAGAACA 000240 000241 AATTAATGCT GTTGCATGGA CCAACTTGGG AGTGTTATAC CTCACAAATG AAAACATTGA GCAAGCTCAT GAGGCTTTCA 000320 000321 AAATGGCTCA ATCCCTTGAT CCATCTTATT TAATGTGCTG GATTGGACAA GCTCTTATTG CTGAGGCAGT TGGAAGTTAT 000400 000401 GACACCATGG ATCTCTTCAG GCACACTACA GAACTAAATA TGCATGTAAG AATCTGAACA TTCTTCTTGA GGATTCATTA 000480 000481 ATGAGAAAAG TGTTATCCTT GTTAAGGGAA TGAATAGATA TTGggctagg catagtggct tatgcctgta atcccagtga 000560 000561 tttgggatgc caaggcagga ggattgcttg aggccagcct ggacaatata gcaagaccct gtctcttaaa aaaaaaaatt 000640 000641 aaaaattagc caggtatgat ggtgtatacc tgtagtccta gctactcagg aggctgaggc aggaggattg agtcctggag 000720 000721 tttcaggata cagtgagcta tgatcatgcc attgcactcc agcctgggca acagagcaag attctgtctc taagaaaagg 000800 000801 aaaaagaaaa TGAATAGATA GTGGTATTAG ATGTTAATGA CATCAGTTGT TTTTATTCTT TATTCTTTCT TAGAAACAGA 000880 000881 TTAG |
Predicted Small Protein
Name | NONHSAT102846_smProtein_194:352 |
Length | 53 |
Molecular weight | 6000.1088 |
Aromaticity | 0.0576923076923 |
Instability index | 46.0365384615 |
Isoelectric point | 9.86492919922 |
Runs | 7 |
Runs residual | 0.0157540199913 |
Runs probability | 0.0455749867515 |
Amino acid sequence | MPLLSTVSSNQSSQNKLMLLHGPTWECYTSQMKTLSKLMRLSKWLNPLIHLI |
Secondary structure | LLEEEEELLLLHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |