NONHSAT105178
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT105178 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1191 nt |
Genomic location |
chr5+:172761034..172762224 |
Exon number |
1 |
Exons |
172761034..172762224 |
Genome context |
|
Sequence |
000001 aaaaaaacac caataagaaa tgggagaatc atggaatcac ctagaaggat gatgcaagaa tgaaacaaat tatcactgtt 000080
000081 gtatcatcct tcaggttttt gatcacattg cctgaagtat tacatcattt ctcgagaaag tataaaagaa gacagaggat 000160 000161 accatttttg tagtcttctt cttcttactt ttatcaaata tagttgtaaa ttcagctata tttttcattt ttctgcacaa 000240 000241 actgtaaaga gaagaaaagt gacagaggaa aatgttgtac agttattagt caaatcagaa gatgaatgca gagagacagc 000320 000321 actatggaag actcgataat ggcgaaactg actgaagtgt ataagcaaag tctcagacta tgagtcctac atgataataa 000400 000401 cctagattaa tttcctcaga tttaaggatt catgagtaaa caatatattt ctaaggataa caaaaaatat gatattctca 000480 000481 tcctgttagt cattcaacag gaatgatttc atcacactat attttgccgc aaaaacttgg agcatcctgt tttgctaaaa 000560 000561 gaatgggggc caattttttt tttttttact ttttatgttt gtttattgaa attttcttga tacagtttga aggggacaaa 000640 000641 tgatgaagtc agatcaaagg tgagtacaaa gatgattgaa aagaaatagg tggtatggaa aggaaagaaa aaaatcactg 000720 000721 gactaaacat tctaattggt gtttataaat ttaaaaataa aaatgctttt caattacaga gaaaagaaga tgaccatctt 000800 000801 ctcctgaaca aaattatgaa ctgtcagagg tttcaaaggt aataagtttt atgatgcaag tggaagaaga accagaagta 000880 000881 atgatgagct agaacttatc agagatttcc ttgaaatcag gacttggtgt ttataagatg ggtctgtccc aggcttatgc 000960 000961 atgacagctg gtgagcagtt agttgcatgc agaggacatt gctcattttg ggcctatcta cactcaaaac caggaaaata 001040 001041 tgctgtgaaa atttgctatt actaacgtct ctaataaagt tttaaaaaac gatcctttta gtcttacttc tgtagattta 001120 001121 ttcataaaca tagaaaggat ccattggacc ctgatggtaa aagatgatga tgacattttc ctgctacacc g |
Predicted Small Protein
Name | NONHSAT105178_smProtein_59:172 |
Length | 38 |
Molecular weight | 4586.5 |
Aromaticity | 0.135135135135 |
Instability index | 67.5540540541 |
Isoelectric point | 11.8442993164 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0360612713555 |
Amino acid sequence | MKQIITVVSSFRFLITLPEVLHHFSRKYKRRQRIPFL |
Secondary structure | LLEEEEEELLLLLEEELHHHHHHHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |