NONHSAT120302
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT120302 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1498 nt |
Genomic location |
chr7-:43648097..43769083 |
Exon number |
4 |
Exons |
43648097..43649240,43679048..43679280,43705257..43705321,43769028..43769083 |
Genome context |
|
Sequence |
000001 CAAGCCTGGA AGAACTCGTC ATGCTCTTTG TAGCGTGGTG CTTCTGTTGC TCACAGaggt gcctgcttcc ccttctgcca 000080
000081 tgattggaag tttcctgagg cctccccagc catgtggaac tGTGGCACCT TGACGAGGTC TTTTTAGAGC TCAAGGATGG 000160 000161 TCAGCAGATT CCTGTGTTCA AGCTCAGTGG GGAAAACGGT GATGAAGTGA AAAAGGAGTA GAGACGACCC AGAAGACCCA 000240 000241 GCTTGCTTCT AGTCCATCCT TCCCTCATCT CTACCATATG GCCACTGGGG TGGTGGCCCA TCTCAGTGAC AGACACTCCT 000320 000321 GCAACCCAGT TTTCCAGCCA CCAGTGGGAT GATGTTGCAC CTGGACTTGA TATGAAAGTA ACCATCAGAA AATCAACAGA 000400 000401 GATCTTAAAC TTGCCTACCA CAGACACCTG CAGGAATATA CTAAGAATCA TCAtagtgga cctttattgt ctcctgagca 000480 000481 cccattcttt gttctttcag aaacacaact ggttttgaga atccatccct tcttcactca gtccacgtaa aggttaggat 000560 000561 ggTAGAAAGT GTTATACCTC TTCCTCCAGA GTTGGAGCCT ATGACACTGA TGACACTGGC ATGGAAAGCC AAAGCCCTAC 000640 000641 ACCAACCAGC ACACTTACTG GTTCCAAATT GATCTACGCT GGTGTAATCA GAGTGAATCT CAGAACTTTG GACAGAGCTG 000720 000721 TGAGCAGAGA CTGACTTTCC TGCTGTCTCC AGGTAGCTGC AAGGCTGAAC AGCAGCACCT ACTTTATTAC CATCTTACTG 000800 000801 TCATTCAaag aaggcagagc tgaatgctgg agaaaaactg agtactagca acagtttttg aaccctgaat actgtcataa 000880 000881 ctgaagctag aattatccct ggacttgttt gccactaaaa tttccttgtt ttgcttaccc tggtttcagc tggcaccctg 000960 000961 atcacttgaa aGGAACATAA CTGATATACT GTCCTTTGTT TTTCTTTCCT TCCTCTTCTC CGCCTTTGAT GATTTTAAAT 001040 001041 TAGAAATCTA CCTGCCTCTA ATCTCTTTAA TTTTCTCATT TATTTACTGC TGCCTATTTT CCAAAACACT GCTTCTCGAA 001120 001121 TATTCCTGGC TCAAAAATCA TCTATGTCTT CATGACATAT GAAACCCCTA GAATCCAGCC TTTCCCCAGC TTTTAATATC 001200 001201 TCCTAATTGA TTTCTCAATT CCAGTGAAAT GATTCCATTT ATTTTTTTCC CAAACACATC ACAAATATTC CTAACTCTTG 001280 001281 TGAGCAATTT TCTCTCATTC TTCTCAACTT ATCTAAATCC TAACTTTTCA AAAGATCTAG CTCAAGTTCT GTCTTATCAT 001360 001361 ATTTTGAGTT CCTTTCTTTG GCATTGTATT ATTTTGTATC TTTCCATGTA CACATGTGTG CATTATCTCC CTGATAAAAC 001440 001441 TAACTGGCTA GAGGATAGGA GTAAAGACTC AATTCTAATA TCCTTGTTAC CTAATAAT |
Predicted Small Protein
Name | NONHSAT120302_smProtein_371:517 |
Length | 49 |
Molecular weight | 5737.7613 |
Aromaticity | 0.104166666667 |
Instability index | 40.8083333333 |
Isoelectric point | 9.30096435547 |
Runs | 9 |
Runs residual | 0.0219298245614 |
Runs probability | 0.0338966417399 |
Amino acid sequence | MKVTIRKSTEILNLPTTDTCRNILRIIIVDLYCLLSTHSLFFQKHNWF |
Secondary structure | LEEEEELLLEELLLLLLHHHHHHHHHHHHHHHHHHHHLLHHHHHLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooo |