NONHSAT129000
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT129000 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
844 nt |
Genomic location |
chr8-:127565060..127568664 |
Exon number |
2 |
Exons |
127565060..127565748,127568510..127568664 |
Genome context |
|
Sequence |
000001 TTGCAGTAGC AGCCGCTGCT CCCTTTCTCC CTCTCTTCCT CCCTCTTTTG CCACTGTCTG GGCCCCATCT GGGATTCCTG 000080
000081 GGCCCTTTGG AAAAGAGTTG GTGAAATGCG CAGCCGGCTG TGGACGGGGG AGGAGGAAGG GGACAGAGGG AGCAGGAATA 000160 000161 AGACTGTAGA ACTGTTTTGT ACTGTGAATT ACGGATGCTC TTTGAAGGAA AGAAATATCG ATTCTAATGT TCTTCAGAAG 000240 000241 TTCTGGCAGG GATAAGCAGG ACATCGACTG GAACGTATGC TAAATGAAAG CAGACAAATT TCTATTTTCT TACCTGAGCA 000320 000321 AATATTTTAT TGAAACTGCT TATGTATGTC AAAGGAGCCC ACAACTTCAG CTACACAACT TTTTGTATTG AAAGAACTCA 000400 000401 TACTTTTTGT AGCTTTTATT TCACATTTAA TTTAAAGTGA CTTTTAGCAC TAAAATGCCT AGAAGATTTT ACTCCAGACC 000480 000481 TATAAGGAAA TGTTTAGTTT TTATGAAAAA TGACAAGTCG ATGGTTAAAC TTCTCATGTC TTTGGTGCTT TGGCCCTAAT 000560 000561 AGCACTGGAC AACACCACGA CCACATGGAA ACATATTTTT GGAAGCAAAA CTTTAATTTT ATATAACGTA TGCTATGGAG 000640 000641 AGCTAAGACA ATTTAAGGAC TACTTGTTTT CTATTTTTTT TCTTAATAAA ATGGAATCCA CTGTGTTGAA GACTCTTGAT 000720 000721 ATCATGTGCT TGTCTAACCA TTTTTTGTTT TATAAATTAG AATAAAATAT AGTTGTGATA ATGGTCATCG AATGGATTTG 000800 000801 TTTGGAAAGC TACATCTTAT TTGTGAAATG TTTTTTAAAT CAGA |
Predicted Small Protein
Name | NONHSAT129000_smProtein_509:625 |
Length | 39 |
Molecular weight | 4712.2453 |
Aromaticity | 0.236842105263 |
Instability index | 44.3684210526 |
Isoelectric point | 6.80035400391 |
Runs | 7 |
Runs residual | 0.0115997229917 |
Runs probability | 0.0232417291241 |
Amino acid sequence | MTSRWLNFSCLWCFGPNSTGQHHDHMETYFWKQNFNFI |
Secondary structure | LLEEEELLEEEELLLLLLLLLLHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |