NONHSAT129611
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT129611 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
817 nt |
Genomic location |
chr8-:144702808..144715013 |
Exon number |
2 |
Exons |
144702808..144703070,144714460..144715013 |
Genome context |
|
Sequence |
000001 CCCGGTCCAA GCCACACAGG AAGCCCACAC TGGCTTCTGA GCAGGAGTGT AACAAAAGCC AGATGACACT GGAAAGACAC 000080
000081 GTTGGCTGCG TGGTGACCAC AGAGGACAGG GTGAGGACGG TGGCAATGGC AGCCACACAG CAGAGCACCT GGGGTGAGAC 000160 000161 TGGACCGAGC CAGGAAGAGG CAGGGACTGG CTCTGAAGGC CGAGGGAGGG TTCACAGGAG GGTGGGGAGT GGGCAGGAAG 000240 000241 CTGACATCCA TGGTGACGCA GGGTGGGGCA GGTGGGAGAA AGGTGAAAGA AGAACAGAAG GTCACTTTGG GATGTAAGTT 000320 000321 TGAGACCTTG CTGCTAAGTG AGGCCAAAAA ATTAAAAGAT TTTTAAAATC TGCTGGTAGC TGGAGAAGGA CCCGAGACGT 000400 000401 GCAGATGGGA GTTGTGGCAG TAGTGGCCAT CTTGAGGGAC AGACACCGGG AGAAAACGAG TGATGCGTGC AAGGAGGGGC 000480 000481 ATCGCTGAGC CCACACAAGA CTCAAGATGG ATGAGACAGA GGCGGCCTCA GGTGCCTGCA GGTGGAGAGA GAAGcactgg 000560 000561 gaagcctgaa ggagcatgag aaagactgtT GCTGTAAGAC ACGGCGCTAT ctatggcctg aatatttgtt atctgttgaa 000640 000641 atcctaaccc cgaaggtgat ggtatgagga ggtgaggact ttgggatggg atgactgctc tcataaagga ggctagagaa 000720 000721 aggctcctgg ccctttccag caggcgagga cacagatgcc atcttgaacc aggaagtggc cacaccagac acggaatctg 000800 000801 ccagcacctg gttcctg |
Predicted Small Protein
Name | NONHSAT129611_smProtein_62:316 |
Length | 85 |
Molecular weight | 9165.8838 |
Aromaticity | 0.047619047619 |
Instability index | 46.130952381 |
Isoelectric point | 6.05474853516 |
Runs | 15 |
Runs residual | 0.0445859872611 |
Runs probability | 0.0406229759171 |
Amino acid sequence | MTLERHVGCVVTTEDRVRTVAMAATQQSTWGETGPSQEEAGTGSEGRGRVHRRVGSGQEA DIHGDAGWGRWEKGERRTEGHFGM |
Secondary structure | LEEEEEEEEEEELLLLEEEEHHHHEELLLLLLLLLLLLLLLLLLLLLEEEEEEELLLEEE EEELLLLLLEEEELLEEEELLLLL |
PRMN | - |
PiMo | - |