NONHSAT134993
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT134993 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
886 nt |
Genomic location |
chr9+:131594024..131594909 |
Exon number |
1 |
Exons |
131594024..131594909 |
Genome context |
|
Sequence |
000001 ctggtcTCGA ACTTAGATCT TATACTAAAT TTGTTGTGAT TTTTGACAGG TTTATTTTGT AGGCATGACT GATTAAGACA 000080
000081 TTGGCCATTT GAAAAAACAA ACACAAAAAT CCCCCCAAAA CAACAATAAC AAACAGACAT GGACCATGTG ATTGGGCTCA 000160 000161 AAGTCTAGTC CCTCACACCT CCATGGAGGC AGAGATGGAG GGGGCCCGAT GGGCTAAAAG TTCTGACCCC GTAATCGTAC 000240 000241 AGTGCAGAGG GATTCCATGT GACTAACaag acatgcctat cttccagaaa ctccaaggat tttaggaatt ctttactaag 000320 000321 gaccaggggc aaacaccaaa tatgtatttt attatatgat aTATTCCTAT Cagctccccc agttaaacat atgatatgag 000400 000401 ccaaacccat gcgcttgcta tgcaaatgca acttcaagac caggccccta acaccacctt ccaaagaaat tCAGGAGCTA 000480 000481 CTATTGCTAT CCAGTGAGAC TCAATCGGGG ccagctagaa ggcctgggca caccacttca cctcacctcc agagtgcttt 000560 000561 cctctcttgt gaactggaga taactcaggt ctcagtctca gagggttgtg taagatgatg tgcgtctgag tgcctcgcag 000640 000641 gtagggcttg cacgatcaac attcagtCCT CCTCCTGAGA ATTATTTAAG TCCCTGGTCC TCCTGGCCCC CACTGTGCTG 000720 000721 TTCTCTCACC CCTGTGGGAA TGTCCATGTC TTCCTTGTCA CGAACCCCAA TCCTCTCcac acacacacac acacacaaac 000800 000801 acaTATGACA CCCCCACCCC AGCCACCACA CCCAGCACCA ATAACTGCTA CCATCAGATT AATATGAGAg gccagctatg 000880 000881 gtggct |
Predicted Small Protein
Name | NONHSAT134993_smProtein_395:496 |
Length | 34 |
Molecular weight | 3633.0557 |
Aromaticity | 0.030303030303 |
Instability index | 48.1636363636 |
Isoelectric point | 6.49566650391 |
Runs | 7 |
Runs residual | 0.0279973649539 |
Runs probability | 0.0394049511698 |
Amino acid sequence | MSQTHALAMQMQLQDQAPNTTFQRNSGATIAIQ |
Secondary structure | LLHHHHHHHHHHHHHHLLLLLEELLLLLEEEEL |
PRMN | - |
PiMo | - |