ENST00000426301.2
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000426301.2 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
1322 nt |
Genomic location |
chr1-:144275918..144284857 |
Exon number |
5 |
Exons |
144275918..144276523,144277303..144277410,144279587..144279906,144280578..144280629,144284622..144284857 |
Genome context |
|
Sequence |
000001 GATACATGAT CCCTTAATTC AGGCTCAGGC TGAAGAACTG ACCCACTTAC AACAGAAGAT ACAGGAAGGG AGAGGTGTCT 000080
000081 GCTACCTTTT CACCCAGCAT GTGAAGAACA CAGTCAAGTC TTTTGAGGGC CTTCTCAGGA ACACTGACAT TGCCTACTAC 000160 000161 CAGAGACAGA GATTCTGTGA GCAAATGGTA CAAGGAAGCC AGCTGACAGA GATCCTTGTC AGAAAACTTG CCACAGAAAA 000240 000241 TCACAATGGT AAGAAAAATG AAGACAGGCA AAAGCCACTG GCTCCCAGGC ACACTTTACT CCCAGTCAAA AGTGGACTGT 000320 000321 ATACTTCCTC TTTGATGTGA TGGTCCCTTT GGTTTTGGTG CCTCTTCCAT GAGCTTCAGA TCAGAACTAG CTATGTGGTT 000400 000401 CCAGGCTGCC TTGGTTTAAT CCCTTGTCTT GCCTACTTCA CCTGGCTCAA GAGGGAAGTC CAGGAGGAAG AAATGGATGA 000480 000481 AGTCCTGGAG TACTCACTAG ATGAACAGTA TTTGACTCAT TCCAGCTGCC ATGACTCCCA CCAGCTTCCC AGCAGCAATG 000560 000561 CCTTCCTCTT TGATGCACAG GAAGGCCCCT CGGCTGTGGA AACAGCCAAA GATGAGATCC AGAGCCAGTG GCAGCACCTG 000640 000641 AAGGAGACCC TTTTCATCAA CAACTGCCTG TGAGAAAAGC TAGAACGTCA TCACAGCAGC TTTGATGAAG AAAATGGATG 000720 000721 CACCTCTAAC CTCTACAGGC AAATCATAGA TTCCATTGTC CAGCTGTATA ATGAAAACAG AGTTCTCAGA GAAGAATACC 000800 000801 GGAGACTCTC CCGACTTGCC TGAATCAAAT TTCCAGAGGT AAGTGGTGAA AGGCCACAAT ATGAAGTCAC TCTCAGATGG 000880 000881 GTCCCTTCTC TTGCCACACT CCACTGTAGA AATAAAAGAG GACGGGGAGG CCAGAGCTGC TCAAAACCTT ATAACCCACA 000960 000961 ATTCTCATAG CTATTCTCAA CTTAGAGAGG GCTGCTTTCT AGACACACCC CCTCCAGGCC CCCAGACTGC CAGGCTCCAG 001040 001041 GAATAAGTAG CTCTAAGAAA TACAGTATTT CGGTGCGAGC CACACCCCAC TCTTGCAAAT TGGAGAAGAG AAGGACAAAC 001120 001121 TTAAAAGGTG AAAAGATTTA ACAGAACAAC AGGGTGAAAC CCCATCTCTA ATAAAAATAC AAAACTTAGC TGGGCGTGGT 001200 001201 GGCATGCACC TGTAGTCCCA GCTACTCAGG AGGCTGAGGC AGGAGAATCA TTTCAACCCA GGAGGCAGAC GTTGCAGCGA 001280 001281 GCCAAATTTG CGCCACTGCA TTCTAGCCTG AGTGACAGAG CA |
Predicted Small Protein
Name | ENST00000426301.2_smProtein_860:1045 |
Length | 62 |
Molecular weight | 6673.3315 |
Aromaticity | 0.0327868852459 |
Instability index | 42.3868852459 |
Isoelectric point | 5.45867919922 |
Runs | 11 |
Runs residual | 0.0275108347466 |
Runs probability | 0.038067479244 |
Amino acid sequence | MKSLSDGSLLLPHSTVEIKEDGEARAAQNLITHNSHSYSQLREGCFLDTPPPGPQTARLQ E |
Secondary structure | LLLLLLLEEELLLLLEEEELLHHHHHHHHHHHHLLLLHHHHLLLEEELLLLLLLLLLLLL L |
PRMN | - |
PiMo | - |