MTD

Species: Homo sapiens Sus scrofa Rattus norvegicus Mus musculus
Tissue: AllAdipose Adrenal B-Cell Blood Brain Breast Bronchial epithelial cells Cerebellum Colon Corneal endothelial Endometrial stromal Epidermal keratinocytes Epithelial Foot fibroblasts Foreskin fibroblast Heart Kidney Liver Lung Lymph Macrophage Muscle Ovary Pancreatic islet-cells Prostate Retina Skin Tcell Testis Thyroid White blood cells
RPKM > CV <  Chromosome: Chr  Position: P-arm Q-arm Centromere or telomere All
Strand Sense Antisense All Noncoding Coding All Transcripts Transcriptional direction Towards telomere Towards centromere All
Length Long Medium Short All Expression Level High Moderate Low All
Alternative splicing events: Alternative Promoter Alternative Exon (Skipped Exon) Alternative Poly(A) (Multiselect, single select, or deselect)
Housekeeping    Tissue-specific  All 
Show: 30 50 100 200

RPKM is reads per kilobase of coding sequence per million mappable reads, which represents gene/isoform expression level.

CV is abbreviated from coefficient of variation, which stands for the fluctuation of gene/isoform expression levels across tissues.

Length of isoform: Long: length>500bp, Medium: 100bp<length≤500bp, Short: 20bp≤length≤100bp.

Expression level of isoform: High: RPKM>100, Moderate: 10<RPKM≤100, Low: RPKM≤10. If isoforms expressed differentially in different tissues or cell lines, the highest expression level is considered.