| Title | Integrated single-nucleus and spatial transcriptomics reveals essential regulators for soybean nodule symbiosis establishment |
|---|---|
| Description | Integrated single-nucleus and spatial transcriptomics reveals essential regulators for soybean nodule symbiosis establishment |
| Organism | Glycine max |
| Data Type | Expression Profiling |
| Data Accessibility | Open-access |
| BioProject | PRJCA009893 |
| Release Date | 2024-04-24 |
| Submitter | Zhijian Liu (11930685@mail.sustech.edu.cn) |
| Organization | Southern University of Science and Technology |
| Submission Date | 2022-11-07 |
HTTP download speed may be slow. It is highly recommended that you download the dataset using a dedicated FTP tool (such as FileZilla Client).
| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download |
|---|---|---|---|---|---|---|
| OMIX002290-01 | stereo-seq_All_AnnData | 1 | Expression Profiling | 517.41 MB | h5ad | |
| OMIX002290-02 | snRNA-seq_All_SeuratObject | 1 | Expression Profiling | 177.93 MB | rds | |
| OMIX002290-03 | snRNA-seq_Stele_AnnData | 1 | Expression Profiling | 139.81 MB | h5ad | |
| OMIX002290-04 | snRNA-seq_Stele_SeuratObject | 1 | Expression Profiling | 20.9 MB | rds | |
| OMIX002290-05 | snRNA-seq_All_AnnData | 1 | Expression Profiling | 1.09 GB | h5ad |
| Paper Title | Journal Name | Publish Time | Accession | Citing Type |
|---|---|---|---|---|
| Integrative cross-sample alignment and spatially differential gene analysis for spatial transcriptomics | Nature Communications | 2026-06 | OMIX002290 | Deposit |
| Integrated single-nucleus and spatial transcriptomics captures transitional states in soybean nodule maturation | Nature Plants | 2023-04 | OMIX002290 | Deposit |
| Investigating biological nitrogen fixation via single-cell transcriptomics | Journal of Experimental Botany | 2024-11 | OMIX002290 | Secondary use |
| Integrative cross-sample alignment and spatially differential gene analysis for spatial transcriptomics | bioRXiv | 2025-06 | OMIX002290 | Secondary use |
| eMCI: an Explainable Multimodal Correlation Integration Model for Unveiling Spatial Transcriptomics and Intercellular Signaling | Research | 2024-10 | OMIX002290 | Secondary use |