Single-cell Multi-omics Analysis of Human Testicular Germ Cell Tumor Reveals its Molecular Features and Microenvironment
| Title | Single-cell Multi-omics Analysis of Human Testicular Germ Cell Tumor Reveals its Molecular Features and Microenvironment |
|---|---|
| Description | We used single-cell multi-omics squencing to explore the molecular features and microenvironment of testicular germ cell tumor. These data contain single-cell RNA-seq, Spatial transcriptome sequencing data and scATAC-seq data. We have analyzed and processed these data upstream in CellRanger, and can directly use R or python, etc. for downstream analysis and exploration. |
| Organism | Homo sapiens |
| Data Type | Expression Profiling by NGS |
| Data Accessibility | Open-access |
| BioProject | PRJCA016271 |
| Release Date | 2023-12-07 |
| Submitter | Jingtao Guo (jingtao.guo@ioz.ac.cn) |
| Organization | Institute of Zoology, Chinese Academy of Sciences |
| Submission Date | 2023-05-29 |
The data cannot be downloaded as it has not yet been registered in the Human Genetic Resource Management Platform of MOST.
| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download Times | Download |
|---|---|---|---|---|---|---|---|
| OMIX004217-01 | Second replicate of seminoma sample scATAC-seq | 1 | Expression Profiling by NGS | 1.19 GB | tar | 0 | Unavailable |
| OMIX004217-02 | Second replicate of normal sample scATAC-seq | 1 | Expression Profiling by NGS | 2.93 GB | tar | 0 | Unavailable |
| OMIX004217-03 | First replicate of normal sample scATAC-seq | 1 | Expression Profiling by NGS | 2.7 GB | tar | 0 | Unavailable |
| OMIX004217-04 | Third replicate of seminoma sample scATAC-seq | 1 | Expression Profiling by NGS | 1.01 GB | tar | 0 | Unavailable |
| OMIX004217-05 | First replicate of seminoma sample scATAC-seq | 1 | Expression Profiling by NGS | 1.71 GB | tar | 0 | Unavailable |
| OMIX004217-06 | Spatial transcriptome data of sampleZ | 1 | Expression Profiling by NGS | 51.28 MB | tar | 0 | Unavailable |
| OMIX004217-07 | Spatial transcriptome data of sampleC | 1 | Expression Profiling by NGS | 60.38 MB | tar | 0 | Unavailable |
| OMIX004217-08 | Spatial transcriptome data of sampleJ | 1 | Expression Profiling by NGS | 75.64 MB | tar | 0 | Unavailable |
| OMIX004217-09 | scRNA-seq data of the third sample | 1 | Expression Profiling by NGS | 30.22 MB | tar | 0 | Unavailable |
| OMIX004217-10 | scRNA-seq data of the first sample | 1 | Expression Profiling by NGS | 8.5 MB | tar | 0 | Unavailable |
| OMIX004217-11 | scRNA-seq data of the second sample | 1 | Expression Profiling by NGS | 34.69 MB | tar | 0 | Unavailable |
| OMIX004217-12 | scRNA-seq data of the fourth sample | 1 | Expression Profiling by NGS | 19.63 MB | tar | 0 | Unavailable |