OMIX005190

1Summary

Title	Single-cell atlas of human cell lines
Description	Single-cell atlas of human cell lines generated single-cell transcriptome and single-cell chromatin accessibility data of dozens of cancer cell lines and 2 normal cell lines to illustrate both transcriptional and epigenetic heterogeneity within different cell lines. The plasticity of transcriptomic heterogeneity is demonstrated by lineage tracing and hypoxia treatment.
Organism	Homo sapiens
Data Type	Chromatin Accessibility Profiling
Data Accessibility	Open-access
BioProject	PRJCA020910
Release Date	2023-11-03
Submitter	liang wu (wliang0712@gmail.com)
Organization	BGI-Shenzhen
Submission Date	2023-11-02

2Files & Download

HTTP download speed may be slow. It is highly recommended that you download the dataset using a dedicated FTP tool (such as FileZilla Client).

File ID	File Title	Number/Samples	File Type	File Size	File Suffix	Download
OMIX005190-01	MDA-MB-468_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	40.96 MB	tsv	FTP HTTPs
OMIX005190-02	786-O_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	88.01 MB	tsv	FTP HTTPs
OMIX005190-03	SW480_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	44.33 MB	tsv	FTP HTTPs
OMIX005190-04	Caco-2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	767.5 MB	tsv	FTP HTTPs
OMIX005190-05	RPMI8226_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	97.11 MB	tsv	FTP HTTPs
OMIX005190-06	MDA-MB-468_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	30.38 MB	tsv	FTP HTTPs
OMIX005190-07	HepG2_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	7.96 MB	tsv	FTP HTTPs
OMIX005190-08	HCC1937_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	84.1 MB	tsv	FTP HTTPs
OMIX005190-09	MDA-MB-453_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	80.16 MB	tsv	FTP HTTPs
OMIX005190-10	LS174T_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	1.25 MB	tsv	FTP HTTPs
OMIX005190-11	A549_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	11.66 MB	tsv	FTP HTTPs
OMIX005190-12	SW620_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	50.34 MB	tsv	FTP HTTPs
OMIX005190-13	SCC-4_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	101.56 MB	tsv	FTP HTTPs
OMIX005190-14	BT-474_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	69.62 MB	tsv	FTP HTTPs
OMIX005190-15	LoVo.fragments.tsv.gz	1	Chromatin Accessibility Profiling	46.56 MB	tsv	FTP HTTPs
OMIX005190-16	MDA-MB-453_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	72.51 MB	tsv	FTP HTTPs
OMIX005190-17	Hap1_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	35.65 MB	tsv	FTP HTTPs
OMIX005190-18	HT-29_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	64.87 MB	tsv	FTP HTTPs
OMIX005190-19	RPMI8226_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	90.41 MB	tsv	FTP HTTPs
OMIX005190-20	K562_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	74.06 MB	tsv	FTP HTTPs
OMIX005190-21	HCT-15_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	83.03 MB	tsv	FTP HTTPs
OMIX005190-22	HepG2_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	11.13 MB	tsv	FTP HTTPs
OMIX005190-23	T-47D_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	81.81 MB	tsv	FTP HTTPs
OMIX005190-24	SF268_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	46.34 MB	tsv	FTP HTTPs
OMIX005190-25	Hs578T.fragments.tsv.gz	1	Chromatin Accessibility Profiling	731.67 MB	tsv	FTP HTTPs
OMIX005190-26	SNB75_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	66.6 MB	tsv	FTP HTTPs
OMIX005190-27	HNSCCUM-03T_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	35.86 MB	tsv	FTP HTTPs
OMIX005190-28	MDA-MB-361_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	27.8 MB	tsv	FTP HTTPs
OMIX005190-29	RKO.fragments.tsv.gz	1	Chromatin Accessibility Profiling	96.41 MB	tsv	FTP HTTPs
OMIX005190-30	RPE-1_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	15.64 MB	tsv	FTP HTTPs
OMIX005190-31	786-O_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	97.72 MB	tsv	FTP HTTPs
OMIX005190-32	SW620_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	53.87 MB	tsv	FTP HTTPs
OMIX005190-33	SCC-4_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	109.23 MB	tsv	FTP HTTPs
OMIX005190-34	HNSCCUM-03T_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	36.99 MB	tsv	FTP HTTPs
OMIX005190-35	Hap1_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	41.6 MB	tsv	FTP HTTPs
OMIX005190-36	LS174T_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	3.73 MB	tsv	FTP HTTPs
OMIX005190-37	HCT-15_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	74.32 MB	tsv	FTP HTTPs
OMIX005190-38	HNSCCUM-02T_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	26.56 MB	tsv	FTP HTTPs
OMIX005190-39	MCF7.fragments.tsv.gz	1	Chromatin Accessibility Profiling	1.01 GB	tsv	FTP HTTPs
OMIX005190-40	SW480_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	50.14 MB	tsv	FTP HTTPs
OMIX005190-41	DLD-1_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	72.08 MB	tsv	FTP HTTPs
OMIX005190-42	SNB75_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	88.49 MB	tsv	FTP HTTPs
OMIX005190-43	SF295_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	58.06 MB	tsv	FTP HTTPs
OMIX005190-44	HCT116.fragments.tsv.gz	1	Chromatin Accessibility Profiling	476.94 MB	tsv	FTP HTTPs
OMIX005190-45	K562_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	89.88 MB	tsv	FTP HTTPs
OMIX005190-46	Huh7.fragments.tsv.gz	1	Chromatin Accessibility Profiling	129.3 MB	tsv	FTP HTTPs
OMIX005190-47	FaDu_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	102.74 MB	tsv	FTP HTTPs
OMIX005190-48	HCT-8_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	40.39 MB	tsv	FTP HTTPs
OMIX005190-49	HCT-8_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	32.36 MB	tsv	FTP HTTPs
OMIX005190-50	T-47D_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	73.56 MB	tsv	FTP HTTPs
OMIX005190-51	DLD-1_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	80.66 MB	tsv	FTP HTTPs
OMIX005190-52	SF268_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	47.05 MB	tsv	FTP HTTPs
OMIX005190-53	HCC1937_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	102.81 MB	tsv	FTP HTTPs
OMIX005190-54	BT-549_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	9.99 MB	tsv	FTP HTTPs
OMIX005190-55	A549_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	15.83 MB	tsv	FTP HTTPs
OMIX005190-56	SF295_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	54.51 MB	tsv	FTP HTTPs
OMIX005190-57	MDA-MB-361_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	32.47 MB	tsv	FTP HTTPs
OMIX005190-58	ZR-75-1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	702.96 MB	tsv	FTP HTTPs
OMIX005190-59	HT-29_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	66.12 MB	tsv	FTP HTTPs
OMIX005190-60	MDA-MB-231.fragments.tsv.gz	1	Chromatin Accessibility Profiling	1.06 GB	tsv	FTP HTTPs
OMIX005190-61	RPE-1_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	14.85 MB	tsv	FTP HTTPs
OMIX005190-62	HK-2_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	34.76 MB	tsv	FTP HTTPs
OMIX005190-63	FaDu_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	93.09 MB	tsv	FTP HTTPs
OMIX005190-64	BT-549_1.fragments.tsv.gz	1	Chromatin Accessibility Profiling	6.79 MB	tsv	FTP HTTPs
OMIX005190-65	COLO205.fragments.tsv.gz	1	Chromatin Accessibility Profiling	70.54 MB	tsv	FTP HTTPs
OMIX005190-66	HNSCCUM-02T_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	31.17 MB	tsv	FTP HTTPs
OMIX005190-67	BT-474_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	81.71 MB	tsv	FTP HTTPs
OMIX005190-68	HK-2_2.fragments.tsv.gz	1	Chromatin Accessibility Profiling	38.14 MB	tsv	FTP HTTPs

3Relevant Publications

Paper Title	Journal Name	Publish Time	Accession	Citing Type
Single cell multi-omics reveal intra-cell-line heterogeneity across human cancer cell lines	Nature Communications	2023-12	OMIX005191 OMIX005190	Deposit

Registration number
Backup number