Single-cell atlas of human cell lines using RNA-seq
| Title | Single-cell atlas of human cell lines using RNA-seq |
|---|---|
| Description | Single-cell atlas of human cell lines generated single-cell transcriptome and single-cell chromatin accessibility data of dozens of cancer cell lines and 2 normal cell lines to illustrate both transcriptional and epigenetic heterogeneity within different cell lines. The plasticity of transcriptomic heterogeneity is demonstrated by lineage tracing and hypoxia treatment. |
| Organism | Homo sapiens |
| Data Type | Expression Profiling by NGS |
| Data Accessibility | Open-access |
| BioProject | PRJCA020910 |
| Release Date | 2023-11-03 |
| Submitter | liang wu (wliang0712@gmail.com) |
| Organization | BGI-Shenzhen |
| Submission Date | 2023-11-02 |
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| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download Times | Download |
|---|---|---|---|---|---|---|---|
| OMIX005191-01 | ZR-75-1_Hypoxia.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 15.49 MB | txt | 0 | |
| OMIX005191-02 | ZR-75-1.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 13.12 MB | txt | 0 | |
| OMIX005191-03 | T-47D.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 10.82 MB | txt | 0 | |
| OMIX005191-04 | SW620_Hypoxia.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 9.11 MB | txt | 0 | |
| OMIX005191-05 | SW620.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 16.05 MB | txt | 0 | |
| OMIX005191-06 | SW480.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 45.35 MB | txt | 0 | |
| OMIX005191-07 | SNB75.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 23.14 MB | txt | 0 | |
| OMIX005191-08 | SK-BR-3.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 19.27 MB | txt | 0 | |
| OMIX005191-09 | SF295.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 10.29 MB | txt | 0 | |
| OMIX005191-10 | SF268.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 17.21 MB | txt | 0 | |
| OMIX005191-11 | SCC-4_2.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 17.52 MB | txt | 0 | |
| OMIX005191-12 | SCC-4.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 11.2 MB | txt | 0 | |
| OMIX005191-13 | RPMI8226.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 32.84 MB | txt | 0 | |
| OMIX005191-14 | RPE-1.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 35.53 MB | txt | 0 | |
| OMIX005191-15 | RKO.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 29.77 MB | txt | 0 | |
| OMIX005191-16 | MDA-MB-468.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 54.71 MB | txt | 0 | |
| OMIX005191-17 | MDA-MB-453.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 16.67 MB | txt | 0 | |
| OMIX005191-18 | MDA-MB-361.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 9.67 MB | txt | 0 | |
| OMIX005191-19 | MDA-MB-231_tracing_T2_SW.txt | 1 | Expression Profiling by NGS | 94.62 KB | txt | 0 | |
| OMIX005191-20 | MDA-MB-231_tracing_T2.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 72.15 MB | txt | 0 | |
| OMIX005191-21 | MDA-MB-231_tracing_T1_SW.txt | 1 | Expression Profiling by NGS | 77.96 KB | txt | 0 | |
| OMIX005191-22 | MDA-MB-231_tracing_T1.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 92.08 MB | txt | 0 | |
| OMIX005191-23 | MDA-MB-231_2.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 21.62 MB | txt | 0 | |
| OMIX005191-24 | MDA-MB-231.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 12.51 MB | txt | 0 | |
| OMIX005191-25 | MCF7.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 17.77 MB | txt | 0 | |
| OMIX005191-26 | LS174T.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 32.84 MB | txt | 0 | |
| OMIX005191-27 | LoVo.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 25.71 MB | txt | 0 | |
| OMIX005191-28 | K-562.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 30.61 MB | txt | 0 | |
| OMIX005191-29 | Huh7.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 28.17 MB | txt | 0 | |
| OMIX005191-30 | HT29.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 28.49 MB | txt | 0 | |
| OMIX005191-31 | Hs578T.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 32.04 MB | txt | 0 | |
| OMIX005191-32 | HNSCCUM-03T.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 19.48 MB | txt | 0 | |
| OMIX005191-33 | HNSCCUM-02T.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 30.89 MB | txt | 0 | |
| OMIX005191-34 | HK-2.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 7.41 MB | txt | 0 | |
| OMIX005191-35 | HepG2.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 67.06 MB | txt | 0 | |
| OMIX005191-36 | HeLa.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 32.34 MB | txt | 0 | |
| OMIX005191-37 | HCT116_tracing_T2_SW.txt | 1 | Expression Profiling by NGS | 182.8 KB | txt | 0 | |
| OMIX005191-38 | HCT116_tracing_T2.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 65.37 MB | txt | 0 | |
| OMIX005191-39 | HCT116_tracing_T1_SW.txt | 1 | Expression Profiling by NGS | 85.04 KB | txt | 0 | |
| OMIX005191-40 | HCT116_tracing_T1.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 74.51 MB | txt | 0 | |
| OMIX005191-41 | HCT116.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 23.52 MB | txt | 0 | |
| OMIX005191-42 | HCT-8.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 13.52 MB | txt | 0 | |
| OMIX005191-43 | HCT-15.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 40.55 MB | txt | 0 | |
| OMIX005191-44 | HCC1937.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 22.6 MB | txt | 0 | |
| OMIX005191-45 | Hap1.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 13.77 MB | txt | 0 | |
| OMIX005191-46 | FaDu.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 29.24 MB | txt | 0 | |
| OMIX005191-47 | DLD-1_Hypoxia.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 24.17 MB | txt | 0 | |
| OMIX005191-48 | DLD-1.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 11.89 MB | txt | 0 | |
| OMIX005191-49 | COLO205.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 21.83 MB | txt | 0 | |
| OMIX005191-50 | Caco-2_2.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 17.96 MB | txt | 0 | |
| OMIX005191-51 | Caco-2.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 16.79 MB | txt | 0 | |
| OMIX005191-52 | BT-549.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 13.82 MB | txt | 0 | |
| OMIX005191-53 | BT-474.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 32.29 MB | txt | 0 | |
| OMIX005191-54 | A549.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 85.58 MB | txt | 0 | |
| OMIX005191-55 | A-253.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 11.91 MB | txt | 0 | |
| OMIX005191-56 | 786-O.count_mtx.tsv.txt | 1 | Expression Profiling by NGS | 51.14 MB | txt | 0 |