| Title | Spatial Transcriptomics for adult mouse brain (H&E image and coordinates set) |
|---|---|
| Description | Here we collected wild-type mouse brains at 4-months (4WT) and 24-months old (24WT), AD mouse brain at 24-months old (24AD) and AD mouse with SL treatment at 24-months old (24SL). The spatial transcriptomics libraries were constructed by using 10X Visium.The hematoxylin & eosin stain (H&E) images and coordinates here are for corresponding RNA-sequencing datasets in 10X Visium experiments. |
| Organism | Mus musculus |
| Data Type | Other Type of Image Data |
| Data Accessibility | Open-access |
| BioProject | PRJCA023205 |
| Release Date | 2025-11-26 |
| Submitter | Cheng Peng (chengpeng@ynu.edu.cn) |
| Organization | Yunnan University |
| Submission Date | 2024-02-20 |
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| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download |
|---|---|---|---|---|---|---|
| OMIX005854-01 | 4WT | 1 | Other Type of Image Data | 43.4 MB | tif | |
| OMIX005854-02 | 24WT | 1 | Other Type of Image Data | 45.8 MB | tif | |
| OMIX005854-03 | 24AD | 1 | Other Type of Image Data | 44.9 MB | tif | |
| OMIX005854-04 | 24SL | 1 | Other Type of Image Data | 44.2 MB | tif | |
| OMIX005854-05 | 4WT_positions_coordinates | 1 | Other Type of Image Data | 145.4 KB | csv | |
| OMIX005854-06 | 24WT_positions_coordinates | 1 | Other Type of Image Data | 145.5 KB | csv | |
| OMIX005854-07 | 24AD_positions_coordinates | 1 | Other Type of Image Data | 145.4 KB | csv | |
| OMIX005854-08 | 24SL_positions_coordinates | 1 | Other Type of Image Data | 145.5 KB | csv | |
| OMIX005854-09 | 4WT count matrix (Seurat object) | 1 | Other Type of Image Data | 72.4 MB | rda | |
| OMIX005854-10 | 24WT count matrix (Seurat object) | 1 | Other Type of Image Data | 81.0 MB | rda | |
| OMIX005854-11 | 24AD count matrix (Seurat object) | 1 | Other Type of Image Data | 85.8 MB | rda | |
| OMIX005854-12 | 24SL count matrix (Seurat object) | 1 | Other Type of Image Data | 92.3 MB | rda |
| Paper Title | Journal Name | Publish Time | Accession | Citing Type |
|---|---|---|---|---|
| Modifying Glucose Metabolism Reverses Memory Defects of Alzheimer's Disease Model at Late Stages | Advanced Science | 2025-12 | OMIX005854 | Deposit |