The Bifidobacterium-dominated fecal microbiome in dairy calves shapes the characteristic growth phenotype of host
| Title | The Bifidobacterium-dominated fecal microbiome in dairy calves shapes the characteristic growth phenotype of host |
|---|---|
| Description | The dominant bacteria in the hindgut of calves play an important role in their growth and health, which could even lead to lifelong consequences. However, the identification of core probiotics in the hindgut and its mechanism regulating host growth remain unclear. Here, a total of 1045 fecal samples were analyzed by 16S rRNA gene sequencing from the 408 Holstein dairy calves at the age of 0, 14, 28, 42, 56 and 70 days to characterize the dynamic changes of core taxa. |
| Organism | Bos taurus |
| Data Type | Metabolome Data by Mass Spectrometry (MS) |
| Data Accessibility | Open-access |
| BioProject | PRJCA027522 |
| Release Date | 2024-07-02 |
| Submitter | yimin zhuang (z1164323345@163.com) |
| Organization | China Agricultural University |
| Submission Date | 2024-06-29 |
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| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download Times | Download |
|---|---|---|---|---|---|---|---|
| OMIX006769-01 | POS_Gg12ZYM_d70_11 | 1 | Metabolome Data by Mass Spectrometry (MS) | 71.09 MB | raw | 0 | |
| OMIX006769-02 | POS_Gg12ZYM_d70_12 | 1 | Metabolome Data by Mass Spectrometry (MS) | 71.74 MB | raw | 0 | |
| OMIX006769-03 | POS_Gg13ZYM_D58 | 1 | Metabolome Data by Mass Spectrometry (MS) | 74.02 MB | raw | 0 | |
| OMIX006769-04 | POS_Gg13ZYM_D65 | 1 | Metabolome Data by Mass Spectrometry (MS) | 73.9 MB | raw | 0 | |
| OMIX006769-05 | NEG_Gg13ZYM_D47 | 1 | Metabolome Data by Mass Spectrometry (MS) | 77.87 MB | raw | 0 | |
| OMIX006769-06 | POS_Gg13ZYM_D50 | 1 | Metabolome Data by Mass Spectrometry (MS) | 74.07 MB | raw | 0 | |
| OMIX006769-07 | NEG_Gg13ZYM_D50 | 1 | Metabolome Data by Mass Spectrometry (MS) | 77.68 MB | raw | 0 | |
| OMIX006769-08 | NEG_Gg12ZYM_d70_18 | 1 | Metabolome Data by Mass Spectrometry (MS) | 81.28 MB | raw | 0 | |
| OMIX006769-09 | NEG_Gg12ZYM_d70_20 | 1 | Metabolome Data by Mass Spectrometry (MS) | 80.69 MB | raw | 0 | |
| OMIX006769-10 | POS_Gg13ZYM_D53 | 1 | Metabolome Data by Mass Spectrometry (MS) | 73.71 MB | raw | 0 | |
| OMIX006769-11 | NEG_Gg13ZYM_D62 | 1 | Metabolome Data by Mass Spectrometry (MS) | 78.27 MB | raw | 0 | |
| OMIX006769-12 | NEG_Gg13ZYM_D52 | 1 | Metabolome Data by Mass Spectrometry (MS) | 77.56 MB | raw | 0 | |
| OMIX006769-13 | POS_Gg13ZYM_D61 | 1 | Metabolome Data by Mass Spectrometry (MS) | 74.37 MB | raw | 0 | |
| OMIX006769-14 | POS_Gg13ZYM_D46 | 1 | Metabolome Data by Mass Spectrometry (MS) | 72.06 MB | raw | 0 | |
| OMIX006769-15 | NEG_Gg12ZYM_d70_6 | 1 | Metabolome Data by Mass Spectrometry (MS) | 80.02 MB | raw | 0 | |
| OMIX006769-16 | NEG_Gg13ZYM_D64 | 1 | Metabolome Data by Mass Spectrometry (MS) | 77.89 MB | raw | 0 | |
| OMIX006769-17 | POS_Gg12ZYM_d70_3 | 1 | Metabolome Data by Mass Spectrometry (MS) | 72 MB | raw | 0 | |
| OMIX006769-18 | NEG_Gg12ZYM_d70_2 | 1 | Metabolome Data by Mass Spectrometry (MS) | 79.26 MB | raw | 0 | |
| OMIX006769-19 | POS_Gg13ZYM_D54 | 1 | Metabolome Data by Mass Spectrometry (MS) | 72.68 MB | raw | 0 | |
| OMIX006769-20 | POS_Gg13ZYM_D64 | 1 | Metabolome Data by Mass Spectrometry (MS) | 74.07 MB | raw | 0 | |
| OMIX006769-21 | NEG_Gg12ZYM_d70_7 | 1 | Metabolome Data by Mass Spectrometry (MS) | 79.31 MB | raw | 0 | |
| OMIX006769-22 | POS_Gg12ZYM_d70_4 | 1 | Metabolome Data by Mass Spectrometry (MS) | 72.41 MB | raw | 0 | |
| OMIX006769-23 | POS_Gg13ZYM_D48 | 1 | Metabolome Data by Mass Spectrometry (MS) | 74.21 MB | raw | 0 | |
| OMIX006769-24 | NEG_Gg12ZYM_d70_5 | 1 | Metabolome Data by Mass Spectrometry (MS) | 79.39 MB | raw | 0 | |
| OMIX006769-25 | POS_Gg13ZYM_D56 | 1 | Metabolome Data by Mass Spectrometry (MS) | 75.64 MB | raw | 0 | |
| OMIX006769-26 | POS_Gg12ZYM_d70_17 | 1 | Metabolome Data by Mass Spectrometry (MS) | 71.24 MB | raw | 0 | |
| OMIX006769-27 | NEG_Gg13ZYM_D46 | 1 | Metabolome Data by Mass Spectrometry (MS) | 77.68 MB | raw | 0 | |
| OMIX006769-28 | NEG_Gg12ZYM_d70_9 | 1 | Metabolome Data by Mass Spectrometry (MS) | 79.49 MB | raw | 0 | |
| OMIX006769-29 | POS_Gg12ZYM_d70_14 | 1 | Metabolome Data by Mass Spectrometry (MS) | 71.34 MB | raw | 0 | |
| OMIX006769-30 | NEG_Gg13ZYM_D49 | 1 | Metabolome Data by Mass Spectrometry (MS) | 77.32 MB | raw | 0 | |
| OMIX006769-31 | NEG_Gg12ZYM_d70_8 | 1 | Metabolome Data by Mass Spectrometry (MS) | 79.49 MB | raw | 0 | |
| OMIX006769-32 | POS_Gg13ZYM_D57 | 1 | Metabolome Data by Mass Spectrometry (MS) | 72.59 MB | raw | 0 | |
| OMIX006769-33 | POS_Gg12ZYM_d70_16 | 1 | Metabolome Data by Mass Spectrometry (MS) | 72.73 MB | raw | 0 | |
| OMIX006769-34 | POS_Gg12ZYM_d70_1 | 1 | Metabolome Data by Mass Spectrometry (MS) | 71.18 MB | raw | 0 | |
| OMIX006769-35 | POS_Gg13ZYM_D62 | 1 | Metabolome Data by Mass Spectrometry (MS) | 75.31 MB | raw | 0 | |
| OMIX006769-36 | POS_Gg13ZYM_D63 | 1 | Metabolome Data by Mass Spectrometry (MS) | 73.78 MB | raw | 0 | |
| OMIX006769-37 | NEG_Gg12ZYM_d70_16 | 1 | Metabolome Data by Mass Spectrometry (MS) | 80.49 MB | raw | 0 | |
| OMIX006769-38 | NEG_Gg12ZYM_d70_13 | 1 | Metabolome Data by Mass Spectrometry (MS) | 80.05 MB | raw | 0 | |
| OMIX006769-39 | POS_Gg12ZYM_d70_10 | 1 | Metabolome Data by Mass Spectrometry (MS) | 71.85 MB | raw | 0 | |
| OMIX006769-40 | POS_Gg13ZYM_D47 | 1 | Metabolome Data by Mass Spectrometry (MS) | 73.25 MB | raw | 0 | |
| OMIX006769-41 | POS_Gg13ZYM_D49 | 1 | Metabolome Data by Mass Spectrometry (MS) | 72.58 MB | raw | 0 | |
| OMIX006769-42 | NEG_Gg12ZYM_d70_11 | 1 | Metabolome Data by Mass Spectrometry (MS) | 80.17 MB | raw | 0 | |
| OMIX006769-43 | NEG_Gg12ZYM_d70_12 | 1 | Metabolome Data by Mass Spectrometry (MS) | 79.53 MB | raw | 0 | |
| OMIX006769-44 | NEG_Gg13ZYM_D54 | 1 | Metabolome Data by Mass Spectrometry (MS) | 77.67 MB | raw | 0 | |
| OMIX006769-45 | NEG_Gg12ZYM_d70_10 | 1 | Metabolome Data by Mass Spectrometry (MS) | 79.97 MB | raw | 0 | |
| OMIX006769-46 | POS_Gg12ZYM_d70_13 | 1 | Metabolome Data by Mass Spectrometry (MS) | 71.25 MB | raw | 0 | |
| OMIX006769-47 | POS_Gg12ZYM_d70_6 | 1 | Metabolome Data by Mass Spectrometry (MS) | 71.78 MB | raw | 0 | |
| OMIX006769-48 | POS_Gg13ZYM_D51 | 1 | Metabolome Data by Mass Spectrometry (MS) | 73.3 MB | raw | 0 | |
| OMIX006769-49 | POS_Gg12ZYM_d70_19 | 1 | Metabolome Data by Mass Spectrometry (MS) | 72.88 MB | raw | 0 | |
| OMIX006769-50 | POS_Gg12ZYM_d70_8 | 1 | Metabolome Data by Mass Spectrometry (MS) | 71.13 MB | raw | 0 | |
| OMIX006769-51 | NEG_Gg12ZYM_d70_4 | 1 | Metabolome Data by Mass Spectrometry (MS) | 79.97 MB | raw | 0 | |
| OMIX006769-52 | NEG_Gg13ZYM_D61 | 1 | Metabolome Data by Mass Spectrometry (MS) | 79.02 MB | raw | 0 | |
| OMIX006769-53 | NEG_Gg12ZYM_d70_14 | 1 | Metabolome Data by Mass Spectrometry (MS) | 79.33 MB | raw | 0 | |
| OMIX006769-54 | POS_Gg12ZYM_d70_20 | 1 | Metabolome Data by Mass Spectrometry (MS) | 72.42 MB | raw | 0 | |
| OMIX006769-55 | POS_Gg12ZYM_d70_9 | 1 | Metabolome Data by Mass Spectrometry (MS) | 72.24 MB | raw | 0 | |
| OMIX006769-56 | POS_Gg13ZYM_D55 | 1 | Metabolome Data by Mass Spectrometry (MS) | 74.76 MB | raw | 0 | |
| OMIX006769-57 | NEG_Gg13ZYM_D63 | 1 | Metabolome Data by Mass Spectrometry (MS) | 77.76 MB | raw | 0 | |
| OMIX006769-58 | NEG_Gg12ZYM_d70_1 | 1 | Metabolome Data by Mass Spectrometry (MS) | 78.57 MB | raw | 0 | |
| OMIX006769-59 | NEG_Gg13ZYM_D55 | 1 | Metabolome Data by Mass Spectrometry (MS) | 78.18 MB | raw | 0 | |
| OMIX006769-60 | POS_Gg12ZYM_d70_2 | 2 | Metabolome Data by Mass Spectrometry (MS) | 71.85 MB | raw | 0 | |
| OMIX006769-61 | NEG_Gg13ZYM_D59 | 1 | Metabolome Data by Mass Spectrometry (MS) | 78.5 MB | raw | 0 | |
| OMIX006769-62 | NEG_Gg12ZYM_d70_19 | 1 | Metabolome Data by Mass Spectrometry (MS) | 79.31 MB | raw | 0 | |
| OMIX006769-63 | NEG_Gg13ZYM_D60 | 1 | Metabolome Data by Mass Spectrometry (MS) | 78.57 MB | raw | 0 | |
| OMIX006769-64 | NEG_Gg12ZYM_d70_15 | 2 | Metabolome Data by Mass Spectrometry (MS) | 79.41 MB | raw | 0 | |
| OMIX006769-65 | POS_Gg12ZYM_d70_5 | 1 | Metabolome Data by Mass Spectrometry (MS) | 71.21 MB | raw | 0 | |
| OMIX006769-66 | POS_Gg12ZYM_d70_15 | 1 | Metabolome Data by Mass Spectrometry (MS) | 71.32 MB | raw | 0 | |
| OMIX006769-67 | NEG_Gg13ZYM_D51 | 1 | Metabolome Data by Mass Spectrometry (MS) | 77.89 MB | raw | 0 | |
| OMIX006769-68 | NEG_Gg13ZYM_D57 | 1 | Metabolome Data by Mass Spectrometry (MS) | 77.34 MB | raw | 0 | |
| OMIX006769-69 | NEG_Gg13ZYM_D58 | 1 | Metabolome Data by Mass Spectrometry (MS) | 78.13 MB | raw | 0 | |
| OMIX006769-70 | NEG_Gg12ZYM_d70_17 | 1 | Metabolome Data by Mass Spectrometry (MS) | 79.95 MB | raw | 0 | |
| OMIX006769-71 | POS_Gg13ZYM_D60 | 1 | Metabolome Data by Mass Spectrometry (MS) | 75.39 MB | raw | 0 | |
| OMIX006769-72 | POS_Gg13ZYM_D52 | 1 | Metabolome Data by Mass Spectrometry (MS) | 72.43 MB | raw | 0 | |
| OMIX006769-73 | POS_Gg12ZYM_d70_7 | 1 | Metabolome Data by Mass Spectrometry (MS) | 71.82 MB | raw | 0 | |
| OMIX006769-74 | NEG_Gg13ZYM_D53 | 1 | Metabolome Data by Mass Spectrometry (MS) | 77.83 MB | raw | 0 | |
| OMIX006769-75 | NEG_Gg13ZYM_D65 | 1 | Metabolome Data by Mass Spectrometry (MS) | 78.16 MB | raw | 0 | |
| OMIX006769-76 | NEG_Gg12ZYM_d70_3 | 1 | Metabolome Data by Mass Spectrometry (MS) | 78.58 MB | raw | 0 | |
| OMIX006769-77 | POS_Gg13ZYM_D59 | 1 | Metabolome Data by Mass Spectrometry (MS) | 76.5 MB | raw | 0 | |
| OMIX006769-78 | NEG_Gg13ZYM_D56 | 1 | Metabolome Data by Mass Spectrometry (MS) | 78.41 MB | raw | 0 | |
| OMIX006769-79 | NEG_Gg13ZYM_D48 | 1 | Metabolome Data by Mass Spectrometry (MS) | 78.22 MB | raw | 0 | |
| OMIX006769-80 | POS_Gg12ZYM_d70_18 | 1 | Metabolome Data by Mass Spectrometry (MS) | 70.95 MB | raw | 0 |