OMIX006769

1Summary

Title	The Bifidobacterium-dominated fecal microbiome in dairy calves shapes the characteristic growth phenotype of host
Description	The dominant bacteria in the hindgut of calves play an important role in their growth and health, which could even lead to lifelong consequences. However, the identification of core probiotics in the hindgut and its mechanism regulating host growth remain unclear. Here, a total of 1045 fecal samples were analyzed by 16S rRNA gene sequencing from the 408 Holstein dairy calves at the age of 0, 14, 28, 42, 56 and 70 days to characterize the dynamic changes of core taxa.
Organism	Bos taurus
Data Type	Metabolome Data by Mass Spectrometry (MS)
Data Accessibility	Open-access
BioProject	PRJCA027522
Release Date	2024-07-02
Submitter	yimin zhuang (z1164323345@163.com)
Organization	China Agricultural University
Submission Date	2024-06-29

2Files & Download

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File ID	File Title	Number/Samples	File Type	File Size	File Suffix	Download
OMIX006769-01	POS_Gg12ZYM_d70_11	1	Metabolome Data by Mass Spectrometry (MS)	71.09 MB	raw	FTP HTTPs
OMIX006769-02	POS_Gg12ZYM_d70_12	1	Metabolome Data by Mass Spectrometry (MS)	71.74 MB	raw	FTP HTTPs
OMIX006769-03	POS_Gg13ZYM_D58	1	Metabolome Data by Mass Spectrometry (MS)	74.02 MB	raw	FTP HTTPs
OMIX006769-04	POS_Gg13ZYM_D65	1	Metabolome Data by Mass Spectrometry (MS)	73.9 MB	raw	FTP HTTPs
OMIX006769-05	NEG_Gg13ZYM_D47	1	Metabolome Data by Mass Spectrometry (MS)	77.87 MB	raw	FTP HTTPs
OMIX006769-06	POS_Gg13ZYM_D50	1	Metabolome Data by Mass Spectrometry (MS)	74.07 MB	raw	FTP HTTPs
OMIX006769-07	NEG_Gg13ZYM_D50	1	Metabolome Data by Mass Spectrometry (MS)	77.68 MB	raw	FTP HTTPs
OMIX006769-08	NEG_Gg12ZYM_d70_18	1	Metabolome Data by Mass Spectrometry (MS)	81.28 MB	raw	FTP HTTPs
OMIX006769-09	NEG_Gg12ZYM_d70_20	1	Metabolome Data by Mass Spectrometry (MS)	80.69 MB	raw	FTP HTTPs
OMIX006769-10	POS_Gg13ZYM_D53	1	Metabolome Data by Mass Spectrometry (MS)	73.71 MB	raw	FTP HTTPs
OMIX006769-11	NEG_Gg13ZYM_D62	1	Metabolome Data by Mass Spectrometry (MS)	78.27 MB	raw	FTP HTTPs
OMIX006769-12	NEG_Gg13ZYM_D52	1	Metabolome Data by Mass Spectrometry (MS)	77.56 MB	raw	FTP HTTPs
OMIX006769-13	POS_Gg13ZYM_D61	1	Metabolome Data by Mass Spectrometry (MS)	74.37 MB	raw	FTP HTTPs
OMIX006769-14	POS_Gg13ZYM_D46	1	Metabolome Data by Mass Spectrometry (MS)	72.06 MB	raw	FTP HTTPs
OMIX006769-15	NEG_Gg12ZYM_d70_6	1	Metabolome Data by Mass Spectrometry (MS)	80.02 MB	raw	FTP HTTPs
OMIX006769-16	NEG_Gg13ZYM_D64	1	Metabolome Data by Mass Spectrometry (MS)	77.89 MB	raw	FTP HTTPs
OMIX006769-17	POS_Gg12ZYM_d70_3	1	Metabolome Data by Mass Spectrometry (MS)	72 MB	raw	FTP HTTPs
OMIX006769-18	NEG_Gg12ZYM_d70_2	1	Metabolome Data by Mass Spectrometry (MS)	79.26 MB	raw	FTP HTTPs
OMIX006769-19	POS_Gg13ZYM_D54	1	Metabolome Data by Mass Spectrometry (MS)	72.68 MB	raw	FTP HTTPs
OMIX006769-20	POS_Gg13ZYM_D64	1	Metabolome Data by Mass Spectrometry (MS)	74.07 MB	raw	FTP HTTPs
OMIX006769-21	NEG_Gg12ZYM_d70_7	1	Metabolome Data by Mass Spectrometry (MS)	79.31 MB	raw	FTP HTTPs
OMIX006769-22	POS_Gg12ZYM_d70_4	1	Metabolome Data by Mass Spectrometry (MS)	72.41 MB	raw	FTP HTTPs
OMIX006769-23	POS_Gg13ZYM_D48	1	Metabolome Data by Mass Spectrometry (MS)	74.21 MB	raw	FTP HTTPs
OMIX006769-24	NEG_Gg12ZYM_d70_5	1	Metabolome Data by Mass Spectrometry (MS)	79.39 MB	raw	FTP HTTPs
OMIX006769-25	POS_Gg13ZYM_D56	1	Metabolome Data by Mass Spectrometry (MS)	75.64 MB	raw	FTP HTTPs
OMIX006769-26	POS_Gg12ZYM_d70_17	1	Metabolome Data by Mass Spectrometry (MS)	71.24 MB	raw	FTP HTTPs
OMIX006769-27	NEG_Gg13ZYM_D46	1	Metabolome Data by Mass Spectrometry (MS)	77.68 MB	raw	FTP HTTPs
OMIX006769-28	NEG_Gg12ZYM_d70_9	1	Metabolome Data by Mass Spectrometry (MS)	79.49 MB	raw	FTP HTTPs
OMIX006769-29	POS_Gg12ZYM_d70_14	1	Metabolome Data by Mass Spectrometry (MS)	71.34 MB	raw	FTP HTTPs
OMIX006769-30	NEG_Gg13ZYM_D49	1	Metabolome Data by Mass Spectrometry (MS)	77.32 MB	raw	FTP HTTPs
OMIX006769-31	NEG_Gg12ZYM_d70_8	1	Metabolome Data by Mass Spectrometry (MS)	79.49 MB	raw	FTP HTTPs
OMIX006769-32	POS_Gg13ZYM_D57	1	Metabolome Data by Mass Spectrometry (MS)	72.59 MB	raw	FTP HTTPs
OMIX006769-33	POS_Gg12ZYM_d70_16	1	Metabolome Data by Mass Spectrometry (MS)	72.73 MB	raw	FTP HTTPs
OMIX006769-34	POS_Gg12ZYM_d70_1	1	Metabolome Data by Mass Spectrometry (MS)	71.18 MB	raw	FTP HTTPs
OMIX006769-35	POS_Gg13ZYM_D62	1	Metabolome Data by Mass Spectrometry (MS)	75.31 MB	raw	FTP HTTPs
OMIX006769-36	POS_Gg13ZYM_D63	1	Metabolome Data by Mass Spectrometry (MS)	73.78 MB	raw	FTP HTTPs
OMIX006769-37	NEG_Gg12ZYM_d70_16	1	Metabolome Data by Mass Spectrometry (MS)	80.49 MB	raw	FTP HTTPs
OMIX006769-38	NEG_Gg12ZYM_d70_13	1	Metabolome Data by Mass Spectrometry (MS)	80.05 MB	raw	FTP HTTPs
OMIX006769-39	POS_Gg12ZYM_d70_10	1	Metabolome Data by Mass Spectrometry (MS)	71.85 MB	raw	FTP HTTPs
OMIX006769-40	POS_Gg13ZYM_D47	1	Metabolome Data by Mass Spectrometry (MS)	73.25 MB	raw	FTP HTTPs
OMIX006769-41	POS_Gg13ZYM_D49	1	Metabolome Data by Mass Spectrometry (MS)	72.58 MB	raw	FTP HTTPs
OMIX006769-42	NEG_Gg12ZYM_d70_11	1	Metabolome Data by Mass Spectrometry (MS)	80.17 MB	raw	FTP HTTPs
OMIX006769-43	NEG_Gg12ZYM_d70_12	1	Metabolome Data by Mass Spectrometry (MS)	79.53 MB	raw	FTP HTTPs
OMIX006769-44	NEG_Gg13ZYM_D54	1	Metabolome Data by Mass Spectrometry (MS)	77.67 MB	raw	FTP HTTPs
OMIX006769-45	NEG_Gg12ZYM_d70_10	1	Metabolome Data by Mass Spectrometry (MS)	79.97 MB	raw	FTP HTTPs
OMIX006769-46	POS_Gg12ZYM_d70_13	1	Metabolome Data by Mass Spectrometry (MS)	71.25 MB	raw	FTP HTTPs
OMIX006769-47	POS_Gg12ZYM_d70_6	1	Metabolome Data by Mass Spectrometry (MS)	71.78 MB	raw	FTP HTTPs
OMIX006769-48	POS_Gg13ZYM_D51	1	Metabolome Data by Mass Spectrometry (MS)	73.3 MB	raw	FTP HTTPs
OMIX006769-49	POS_Gg12ZYM_d70_19	1	Metabolome Data by Mass Spectrometry (MS)	72.88 MB	raw	FTP HTTPs
OMIX006769-50	POS_Gg12ZYM_d70_8	1	Metabolome Data by Mass Spectrometry (MS)	71.13 MB	raw	FTP HTTPs
OMIX006769-51	NEG_Gg12ZYM_d70_4	1	Metabolome Data by Mass Spectrometry (MS)	79.97 MB	raw	FTP HTTPs
OMIX006769-52	NEG_Gg13ZYM_D61	1	Metabolome Data by Mass Spectrometry (MS)	79.02 MB	raw	FTP HTTPs
OMIX006769-53	NEG_Gg12ZYM_d70_14	1	Metabolome Data by Mass Spectrometry (MS)	79.33 MB	raw	FTP HTTPs
OMIX006769-54	POS_Gg12ZYM_d70_20	1	Metabolome Data by Mass Spectrometry (MS)	72.42 MB	raw	FTP HTTPs
OMIX006769-55	POS_Gg12ZYM_d70_9	1	Metabolome Data by Mass Spectrometry (MS)	72.24 MB	raw	FTP HTTPs
OMIX006769-56	POS_Gg13ZYM_D55	1	Metabolome Data by Mass Spectrometry (MS)	74.76 MB	raw	FTP HTTPs
OMIX006769-57	NEG_Gg13ZYM_D63	1	Metabolome Data by Mass Spectrometry (MS)	77.76 MB	raw	FTP HTTPs
OMIX006769-58	NEG_Gg12ZYM_d70_1	1	Metabolome Data by Mass Spectrometry (MS)	78.57 MB	raw	FTP HTTPs
OMIX006769-59	NEG_Gg13ZYM_D55	1	Metabolome Data by Mass Spectrometry (MS)	78.18 MB	raw	FTP HTTPs
OMIX006769-60	POS_Gg12ZYM_d70_2	2	Metabolome Data by Mass Spectrometry (MS)	71.85 MB	raw	FTP HTTPs
OMIX006769-61	NEG_Gg13ZYM_D59	1	Metabolome Data by Mass Spectrometry (MS)	78.5 MB	raw	FTP HTTPs
OMIX006769-62	NEG_Gg12ZYM_d70_19	1	Metabolome Data by Mass Spectrometry (MS)	79.31 MB	raw	FTP HTTPs
OMIX006769-63	NEG_Gg13ZYM_D60	1	Metabolome Data by Mass Spectrometry (MS)	78.57 MB	raw	FTP HTTPs
OMIX006769-64	NEG_Gg12ZYM_d70_15	2	Metabolome Data by Mass Spectrometry (MS)	79.41 MB	raw	FTP HTTPs
OMIX006769-65	POS_Gg12ZYM_d70_5	1	Metabolome Data by Mass Spectrometry (MS)	71.21 MB	raw	FTP HTTPs
OMIX006769-66	POS_Gg12ZYM_d70_15	1	Metabolome Data by Mass Spectrometry (MS)	71.32 MB	raw	FTP HTTPs
OMIX006769-67	NEG_Gg13ZYM_D51	1	Metabolome Data by Mass Spectrometry (MS)	77.89 MB	raw	FTP HTTPs
OMIX006769-68	NEG_Gg13ZYM_D57	1	Metabolome Data by Mass Spectrometry (MS)	77.34 MB	raw	FTP HTTPs
OMIX006769-69	NEG_Gg13ZYM_D58	1	Metabolome Data by Mass Spectrometry (MS)	78.13 MB	raw	FTP HTTPs
OMIX006769-70	NEG_Gg12ZYM_d70_17	1	Metabolome Data by Mass Spectrometry (MS)	79.95 MB	raw	FTP HTTPs
OMIX006769-71	POS_Gg13ZYM_D60	1	Metabolome Data by Mass Spectrometry (MS)	75.39 MB	raw	FTP HTTPs
OMIX006769-72	POS_Gg13ZYM_D52	1	Metabolome Data by Mass Spectrometry (MS)	72.43 MB	raw	FTP HTTPs
OMIX006769-73	POS_Gg12ZYM_d70_7	1	Metabolome Data by Mass Spectrometry (MS)	71.82 MB	raw	FTP HTTPs
OMIX006769-74	NEG_Gg13ZYM_D53	1	Metabolome Data by Mass Spectrometry (MS)	77.83 MB	raw	FTP HTTPs
OMIX006769-75	NEG_Gg13ZYM_D65	1	Metabolome Data by Mass Spectrometry (MS)	78.16 MB	raw	FTP HTTPs
OMIX006769-76	NEG_Gg12ZYM_d70_3	1	Metabolome Data by Mass Spectrometry (MS)	78.58 MB	raw	FTP HTTPs
OMIX006769-77	POS_Gg13ZYM_D59	1	Metabolome Data by Mass Spectrometry (MS)	76.5 MB	raw	FTP HTTPs
OMIX006769-78	NEG_Gg13ZYM_D56	1	Metabolome Data by Mass Spectrometry (MS)	78.41 MB	raw	FTP HTTPs
OMIX006769-79	NEG_Gg13ZYM_D48	1	Metabolome Data by Mass Spectrometry (MS)	78.22 MB	raw	FTP HTTPs
OMIX006769-80	POS_Gg12ZYM_d70_18	1	Metabolome Data by Mass Spectrometry (MS)	70.95 MB	raw	FTP HTTPs

3Relevant Publications

Paper Title	Journal Name	Publish Time	Accession	Citing Type
The Bifidobacterium-dominated fecal microbiome in dairy calves shapes the characteristic growth phenotype of host	NPJ Biofilms and Microbiomes	2024-07	OMIX006769	Deposit

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