OMIX008017

1Summary
Title The metabolic impacts of GPT1 on colorectal cancer cells
Description The gas chromatography mass spectrometry system was applied for metabolomic analysis. Samples were treated with methanol H2O and then transferred to a glass vial. Chloroform was added to each aliquot, and the samples were broken up by ultrasonic homogenizer. The extract was centrifuged at 13000 rpm for 10 min at 4°C to obtain the supernatant, which was subsequently dried in a freeze concentration centrifugal dryer. The derivatized samples were analyzed on an Agilent 7890B GS system, coupled with an Agilent 5977A MSD system (Agilent Technologies Inc., USA). Quality control (QC) samples were applied to monitor the stability and repeatability of instrument analysis.For metabolomics data analysis, the obtained GC/MS raw data were converted into data format files. Then data were imported into MS-DIAL software for peak detection, peak identification, MS2Dec deconvolution, characterization, peak alignment, wave filtering, and missing value interpolation. Metabolite characterization was based on LUG database.
Organism Homo sapiens
Data Type Metabolome Data by Mass Spectrometry (MS)
Data Accessibility Open-access
BioProject PRJCA032854
Release Date 2024-11-28
Submitter Zhenxing Liang (13929590115@163.com)
Organization The Sixth Affiliated Hospital, Sun Yat-sen University
Submission Date 2024-11-26
2Files & Download

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File ID File Title Number/Samples File Type File Size File Suffix Download
OMIX008017-01 raw data 16 Metabolome Data by Mass Spectrometry (MS) 0 B zip
3Relevant Publications
Paper Title Journal Name Publish Time Accession Citing Type
Glutamic-­pyruvic transaminase 1 deficiency–mediated metabolic reprogramming facilitates colorectal adenoma-­carcinoma progression Science Translational Medicine 2025-01 OMIX008017 Deposit

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