| Title | Bulk RNA-seq data of various PDX models and cell lines |
|---|---|
| Description | Various PDX tumors and cell lines (L78,H520, H1703, SK-MES-1, H226) of lung squamous cell carcinoma were freshly collected for RNA extraction using TRIzol reagent. The RNA-seq libraries and sequencing were constructed according to the standard Illumina RNA-seq protocol (NovaSeq 6000, Berry Genomics, Inc.) |
| Organism | Homo sapiens |
| Data Type | Expression Profiling |
| Data Accessibility | Open-access |
| BioProject | PRJCA040976 |
| Release Date | 2025-06-02 |
| Submitter | Yijia Zhou (zhouyj3@shanghaitech.edu.cn) |
| Organization | Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences |
| Submission Date | 2025-06-01 |
The data cannot be downloaded as it has not yet been registered in the Human Genetic Resource Management Platform of MOST.
| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download |
|---|---|---|---|---|---|---|
| OMIX010392-01 | FPKM_table_f_log2_anno_sccpdx | 1 | Expression Profiling | 3.0 MB | csv | Unavailable |
| OMIX010392-02 | FPKM_table_f_log2_anno_scccellline | 1 | Expression Profiling | 1.7 MB | csv | Unavailable |
| Paper Title | Journal Name | Publish Time | Accession | Citing Type |
|---|---|---|---|---|
| Identification of RAPGEF3 as the therapeutic vulnerability of basal-subtype lung squamous cell carcinoma | Oncogene | 2025-09 | OMIX010392 | Deposit |