| Title | AFADESI-MS Spatial Metabolomics & Stereo-seq Spatial Transcriptomics in Adjacent Mouse Brain Sections |
|---|---|
| Description | Spatial metabolomics raw data files (.ibd, .imzML), spatial transcriptomics raw data file (.tar.gz), pre-registration spatial metabolomics data file (.txt), spatial transcriptomics data file (.gef), and ssDNA staining image (.tif), along with post-registration spatial metabolomics and transcriptomics files (.rds). |
| Organism | Mus musculus |
| Data Type | Other type of Spectra Data |
| Data Accessibility | Open-access |
| BioProject | PRJCA045364 |
| Release Date | 2025-09-02 |
| Submitter | haoke deng (416948858@qq.com) |
| Organization | BGI |
| Submission Date | 2025-09-01 |
HTTP download speed may be slow. It is highly recommended that you download the dataset using a dedicated FTP tool (such as FileZilla Client).
| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download |
|---|---|---|---|---|---|---|
| OMIX011674-01 | spatial_metabolomics_raw_data_ibd | 1 | Other type of Spectra Data | 20.6 GB | ibd | |
| OMIX011674-02 | ssDNA_staining_image_tif | 1 | Other type of Spectra Data | 185.85 MB | tif | |
| OMIX011674-03 | spatial_metabolomics_raw_data_imzml | 1 | Other type of Spectra Data | 223.43 MB | imzML | |
| OMIX011674-04 | spatial_transcriptomics_raw_data_tar_gz | 107 | Other type of Spectra Data | 158.8 GB | tar.gz | |
| OMIX011674-05 | spatial_transcriptomics_before_registration_gef | 1 | Other type of Spectra Data | 12.78 GB | tissue.gef | |
| OMIX011674-06 | post_registration_spatial_transcriptomics_rds | 1 | Other type of Spectra Data | 53.35 MB | rds | |
| OMIX011674-07 | post_registration_spatial_metabolomics_rds | 1 | Other type of Spectra Data | 26.4 MB | rds | |
| OMIX011674-09 | spatial_metabolomics_before_registration_txt | 1 | Other type of Spectra Data | 375.6 MB | txt |
| Paper Title | Journal Name | Publish Time | Accession | Citing Type |
|---|---|---|---|---|
| SMIntegration: A Web Tool for Comprehensive Spatial Metabolomics and Transcriptomics Integrated Analysis and Visualization | GigaScience | 2026-03 | OMIX011674 | Deposit |