ccRCC single-cell sequencing
| Title | ccRCC single-cell sequencing |
|---|---|
| Description | To systematically explore the complete tumor ecosystem heterogeneity at a single-cell level in primary tumor and paired tumor thrombus. A total of 22 surgically resected tissue samples were collected from patients with advanced renal cell carcinoma, which including primary tumors (n=9), paired tumor thrombus (n=9) and adjacent renal tissues (n=4). Cell capture and cDNA synthesis were carried out in 10X Genomics platform, and then transcriptome sequencing was performed in NovaSeq 6000 platform after meeting the all quality control. |
| Organism | Homo sapiens |
| Data Type | Transcriptomic |
| Data Accessibility | Controlled-access |
| BioProject | PRJCA005554 |
| Release Date | 2023-07-23 |
| Submitter | Weimin ci (ciwm@big.ac.cn) |
| Organization | Beijing Institute of Genomics, Chinese Academy of Sciences |
| Submission Date | 2021-07-19 |
The data cannot be downloaded as it has not yet been registered in the Human Genetic Resource Management Platform of MOST.
| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download Times | Download |
|---|---|---|---|---|---|---|---|
| OMIX486-20-01 | RCC-tumor-thrombus-scRNA.tar | 1 | Transcriptomic | 7.7 GB | tar | 7 | Unavailable |
| OMIX486-20-02 | RCC-normal-tumor-thrombus-scRNA | 1 | Transcriptomic | 7.13 GB | rds | 0 | Unavailable |