BGIOSGA016118

From RiceWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA016118

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016118, complete gene.

LocusTag

OsI_15336

Ensembl Transcript ID

BGIOSGA016118-TA

Ensembl Protein ID

BGIOSGA016118-PA

Length

2271

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:12226904..12229174

Sequence Coding Region

12226904..12227083,12227175..12227384,12227496..12227615,12228556..12228799,12228882..12229174

Genome Context

<gbrowseImage1> name=IndicaChromosome04:12226904..12229174 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:12226904..12229174 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGCCACCGCCACCGCCTCGCCGCCGCCGCGGCGCTCCTCCTCCTCCTCCTCTCCTCCGCCGCCGCGCTGTCGTCATCGGCGGCGGAGGGGGAGGAGGACCCGCTCATCGAGCAGGTGGTCGGCGGCGGGGAGGAGGACGCGCAGCTGGACGGACTTCGCGAGCTTCGAGCGGCGCGGCTGGACCCCACCGCGACGCACGGCGTCACCAAGTTCTCCGACCTCACCCCGGGCGAGTTCCGCGACCGCTTGCTCGGCCTCCGCCGCCCATCCCTGGAGGGCCTCGTCGGCGGGGAGCCGCACGAGGCCCCCATCCTCCCCACCGACGGCCTCCCCGACGACTTCGACTGGCGCGAGCACGGCGCCGTCGGCCCCGTCAAGGACCAGGGTTCGTGCGGATCGTGCTGGTCGTTCAGCACGTCGGGGGCGCTGGAGGGGGCGCACTTCCTCGCCACGGGGAAGCTGGAGGTGCTCAGCGAGCAGCAGATGGTCGACTGCGACCACGAGTGTGATGCATCAGAATCGCGCGCATGCGACTCAGGATGCAACGGTGGCTTGATGACCACAGCCTTCAGCTACCTCATGAAATCCGGTGGCCTACAGAGCGAGAAAGATTACCCGTACGCTGGACGAGAAAACACCTGCAAGTTCGACAAGTCCAAAATCGTTGCCCAAGTAAAGAACTTCAGTGTGATCTCCGTCAACGAAGATCAAATTGCTGCCAACCTCGTCAAACATGGCCCTCTTGCAATTGCAATCAATGCGGCCTACATGCAGACATACATCGGCGGCGTGTCGTGCCCCTTCATCTGTGGGAGGCACCTTGACCATGGTGTCCTCCTTGTTGGCTACGGATCGGCGGGATACGCACCGATCCGCTTCAAGGAGAAGCCGTACTGGATCATCAAGAACTCGTGGGGCGAGAACTGGGGGGAGAAGGGGTACTACAAGATCTGCAGGGGACCTCATGACAAGAACAAGTGCGGTGTTGATTCCATGGTCTCCTCAGTGACTGCCATCCATACCTCCAAAAAGGAGGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MARHRHRLAAAAALLLLLLSSAAALSSSAAEGEEDPLIEQVVGGGEEDAQLDGLRELRAARLDPTATHGVTKFSDLTPGEFRDRLLGLRRPSLEGLVGGEPHEAPILPTDGLPDDFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHECDASESRACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYAGRENTCKFDKSKIVAQVKNFSVISVNEDQIAANLVKHGPLAIAINAAYMQTYIGGVSCPFICGRHLDHGVLLVGYGSAGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVTAIHTSKKEE</aaseq>

Gene Sequence

<dnaseqindica>1..180#272..481#593..712#1653..1896#1979..2271#ATGGCGCGCCACCGCCACCGCCTCGCCGCCGCCGCGGCGCTCCTCCTCCTCCTCCTCTCCTCCGCCGCCGCGCTGTCGTCATCGGCGGCGGAGGGGGAGGAGGACCCGCTCATCGAGCAGGTGGTCGGCGGCGGGGAGGAGGACGCGCAGCTGGACGGACTTCGCGAGCTTCGAGCGGCGGTTCGGGCGGACGTACCGGGACGCCGGCGAGCGCGCGTACCTGGATGTCCTGTGTTCGCCGCCAACCTCCGCCGCGCGCGGCGTGCACCAGCGGCTGGACCCCACCGCGACGCACGGCGTCACCAAGTTCTCCGACCTCACCCCGGGCGAGTTCCGCGACCGCTTGCTCGGCCTCCGCCGCCCATCCCTGGAGGGCCTCGTCGGCGGGGAGCCGCACGAGGCCCCCATCCTCCCCACCGACGGCCTCCCCGACGACTTCGACTGGCGCGAGCACGGCGCCGTCGGCCCCGTCAAGGACCAGGTTAGGATCGGATCACACCATCGGATTAATTTGGGATGGATTGAAAATTTGAAATCGTTGGAGTTGTTTGATGATGATTGGTTGGTGGATTTGGGGGGTGGGGGGGTGTAGGGTTCGTGCGGATCGTGCTGGTCGTTCAGCACGTCGGGGGCGCTGGAGGGGGCGCACTTCCTCGCCACGGGGAAGCTGGAGGTGCTCAGCGAGCAGCAGATGGTCGACTGCGACCACGAGGTATGTCCCTCTCCTTCGTCTTCGTCTTCCTCCTCGCACATCATCATCAAGCTCTTAAGTTTCTTCTTCTTCTTCTCGAATTGCTAGCTCTCGTTGACTATGAGTTAATGGAACTCGGTTTGATTTTAATTTTGATTCGAGTAGATAGAATAGAAGGAATGACGCAGAGGGATATTCCCGTGGGTTGCTTTGTTGTGACCAGGGTTAAACCTAACGGTTTAGCCGATTTGATCGGTGCCCACTTAAATGCTGAAATTTTTCGGTTCGAAATTTTCGAAATTTTAAATAAAATTTAATTGAATTTGAACAAATATTATTAAAATTCATGAAAAAATTTGAAAATTTCGACCGAAATAATATCGTATCGGAGGGGGTCCGAAATGACCGAAATTTCCAACCCTGGTTGTGACTTACTAGCTGTTGTGTTGTCCTTATCTTTTTATTCTGTCCTGGTTGGTGAGCGACAGAAACTGTAGAGTGAAAGCAAGTTGGAGATTCAGTTCTTTCTCACTTGAAGCAAGTTTTTTGGTGCTTTGGATGAGAAGTAATTATTTTATTTAACCAAATTTATCCCAAATAAATTCGATTGTGTCTTACACATTTTGTAATAGACTTCATATTTTAAGATTGTGTTCTTACCTCTTAGGTTCCCAACCTCCACTCTCTCATTTACCGCACGCATGCTTCCTGAATTATTAAACATTTTTGCAAAAATTCCTATAGAAAAATTGTTATAAAAAAACCATATTAATTCATTTTCAAGTTTTTTAGCTAATACTTAATTAATTATATACTAATAAGCAATCCTGTTTTCCTTGCCCAAAGGAGAGTCCCATCATCTCCTTCCGAACACAGCCTTATCCACATGTTATCTTTACCATTTTTAATTTCATCAAAAGGTGCAGCTAATATATATGCTATGCTCTTGTAAAATTTGCAGTGTGATGCATCAGAATCGCGCGCATGCGACTCAGGATGCAACGGTGGCTTGATGACCACAGCCTTCAGCTACCTCATGAAATCCGGTGGCCTACAGAGCGAGAAAGATTACCCGTACGCTGGACGAGAAAACACCTGCAAGTTCGACAAGTCCAAAATCGTTGCCCAAGTAAAGAACTTCAGTGTGATCTCCGTCAACGAAGATCAAATTGCTGCCAACCTCGTCAAACATGGCCCTCTTGCAAGTAAAGGATTCAAACATTTGCAAAAATTTGAACAAATTGCTGTCATCCGTTTGTCTATTGCTGATGTTTTTGTTTTTTGCAGTTGCAATCAATGCGGCCTACATGCAGACATACATCGGCGGCGTGTCGTGCCCCTTCATCTGTGGGAGGCACCTTGACCATGGTGTCCTCCTTGTTGGCTACGGATCGGCGGGATACGCACCGATCCGCTTCAAGGAGAAGCCGTACTGGATCATCAAGAACTCGTGGGGCGAGAACTGGGGGGAGAAGGGGTACTACAAGATCTGCAGGGGACCTCATGACAAGAACAAGTGCGGTGTTGATTCCATGGTCTCCTCAGTGACTGCCATCCATACCTCCAAAAAGGAGGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016118