BGIOSGA016844

From RiceWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA016844

Description

cDNA clone:001-118-H01, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA016844, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA016844-TA

Ensembl Protein ID

BGIOSGA016844-PA

Length

817

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25740755..25741571

Sequence Coding Region

25740755..25741240,25741395..25741571

Genome Context

<gbrowseImage1> name=IndicaChromosome04:25740755..25741571 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:25740755..25741571 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAACCACGGCGTCCCCGTTCCTGTCCCCGGCCAAGCTGTCGCTCGAGCGCCGGCTCCCGCGCGCGACGTGGACGGCGCGACGAAGCGTCAGGTTCCCGCCGGTGCGAGCCCAAGATCAGCAGCAGCAGGTGAAAGAGGAGGAGGAGGAGGCGGCGGTGGAAAACCTGCCGCCGCCGCCGCAGGAGGAGGAGCAGAGGCGGGAGCGGAAGACGAGGAGGCAGGGGCCGGCGCAGCCGCTGCCGGTGCAGCCGCTGGCGGAGAGCAAGAACATGAGCCGGGAGTACGGCGGGCAGTGGCTGAGTTGCACGACGCGGCACATCCGCATCTACGCCGCGTACATCAACCCGGAGACCAACGCCTTCGACCAGACGCAGATGGACAAGCTCACCCTCCTCCTCGACCCCACCGACGAGTTCGTCTGGACCGACGAGACGTGCCAGAAGGTCTACGACGAGTTCCAGGACCTCGTCGATCACTACGAGGGCGCGGAGCTGTCAGAGTACACGCTTCGTTTGATCGGATCTGATCTTGAGCACTTCATCCGCAAACTGCTATACGATGGGGAGATAAAGTACAACATGATGTCTAGAGTCCTCAATTTCAGCATGGGCAAACCAAGGATCAAATTCAACAGCAGCCAGATCCCAGATGTAAAATAG</cdnaseq>

Protein Sequence

<aaseq>MATTASPFLSPAKLSLERRLPRATWTARRSVRFPPVRAQDQQQQVKEEEEEAAVENLPPPPQEEEQRRERKTRRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYAAYINPETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLRLIGSDLEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIPDVK</aaseq>

Gene Sequence

<dnaseqindica>1..486#641..817#ATGGCAACCACGGCGTCCCCGTTCCTGTCCCCGGCCAAGCTGTCGCTCGAGCGCCGGCTCCCGCGCGCGACGTGGACGGCGCGACGAAGCGTCAGGTTCCCGCCGGTGCGAGCCCAAGATCAGCAGCAGCAGGTGAAAGAGGAGGAGGAGGAGGCGGCGGTGGAAAACCTGCCGCCGCCGCCGCAGGAGGAGGAGCAGAGGCGGGAGCGGAAGACGAGGAGGCAGGGGCCGGCGCAGCCGCTGCCGGTGCAGCCGCTGGCGGAGAGCAAGAACATGAGCCGGGAGTACGGCGGGCAGTGGCTGAGTTGCACGACGCGGCACATCCGCATCTACGCCGCGTACATCAACCCGGAGACCAACGCCTTCGACCAGACGCAGATGGACAAGCTCACCCTCCTCCTCGACCCCACCGACGAGTTCGTCTGGACCGACGAGACGTGCCAGAAGGTCTACGACGAGTTCCAGGACCTCGTCGATCACTACGAGGTATACTACGCACCGTAACTCATAGGCAGAATTGGCAATTGCAAATGCAGGGTAGCAGTAGTGTACACCCATGGTCTCTTTCTCCAGGTGGAAATGTTAGTTGTAAGAGCTTAATTGGTAGTACCTGCTTAACTGACCTGGATTGAATTTACAGGGCGCGGAGCTGTCAGAGTACACGCTTCGTTTGATCGGATCTGATCTTGAGCACTTCATCCGCAAACTGCTATACGATGGGGAGATAAAGTACAACATGATGTCTAGAGTCCTCAATTTCAGCATGGGCAAACCAAGGATCAAATTCAACAGCAGCCAGATCCCAGATGTAAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016844