BGIOSGA016936

From RiceWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA016936

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016936, complete gene.

LocusTag

OSJNBA0005N02.4

Ensembl Transcript ID

BGIOSGA016936-TA

Ensembl Protein ID

BGIOSGA016936-PA

Length

3401

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:27306152..27309552

Sequence Coding Region

27306152..27306290,27306700..27306776,27306881..27306929,27307456..27307540,27307679..27307931
,27309232..27309552

Genome Context

<gbrowseImage1> name=IndicaChromosome04:27306152..27309552 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:27306152..27309552 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAGCGGCGGCGGTGGCTGCGGCAGGAACGGCGCTGTGAGGCAGTACATCAGGTCCAAGGTGCCGAGGCTGAGGTGGACCGGGGAGCTCCACTGCAGCTTCGTCCAAGCCATCGAATTCCTCGGTGGCCAAGACAAGGCTACACCTAAGCTCATTCTTCAGCTCATGGGGGTGAAGGGGCTGACCATATCTCATGTCAAGAGCCACCTCCAGATGTACAGATGCTCCAGGCTCGTCTCCCATGGCACGGGAAGGAGATCAGAGATGCAACCACAGCTGCAAAGGAAGCACTCATGTGGTGCTGATGAGCAAGTCCCCAGAGAATTCCTGTGCCCCCCTCTGAAAAGGACCAGGATGGGGACAGAAGCCACATACAAAGGCATGCAAGGAAGCCAAGGAATCAGTGAGATGAGGACTACTGGCACCCAGTACTGCATTGATGATTACATGCAAGCCATGGCAATGGAGAGGAGAATAAAGGAGGAGGGCCTCAGATGGCAGAGGGATGCTGCTGCTGCTGCTGCTGCTGCAGATGGTGGTGCTGCTGCTTCCAACCTCCAAACCGTGGGATGTTCGGTGCAAGAATCTGACCCCTTTAAGATCATCAAACCAGAAGTGCACCATCTTGGTCCCGTGTTGAAGCTGCAATGCTCCAAGGTGGAGAACAGTGGATTCATCTCCAGCAGCACCGGCACGGCTGCAAGGGATCAACCGGAGCCGCCGCCGCTGGAGAAATGTTCGCTGTCACTCTCCCTCGGTCCAGACCCCAAATGCATGCCGGCGATCGCCTCGTCGCCGAGCGAAAGCAGCTGCATCCTCTCGTCGTCGTCCAGGAGCTTCAGCGACTGCTCCGGGAACTCAGGTTGTCTTGTTGCCCCGGGTGTGAACTTGGAACTCTCCATGTCCATCTGTGGATCTTAG</cdnaseq>

Protein Sequence

<aaseq>MGSGGGGCGRNGAVRQYIRSKVPRLRWTGELHCSFVQAIEFLGGQDKATPKLILQLMGVKGLTISHVKSHLQMYRCSRLVSHGTGRRSEMQPQLQRKHSCGADEQVPREFLCPPLKRTRMGTEATYKGMQGSQGISEMRTTGTQYCIDDYMQAMAMERRIKEEGLRWQRDAAAAAAAADGGAAASNLQTVGCSVQESDPFKIIKPEVHHLGPVLKLQCSKVENSGFISSSTGTAARDQPEPPPLEKCSLSLSLGPDPKCMPAIASSPSESSCILSSSSRSFSDCSGNSGCLVAPGVNLELSMSICGS</aaseq>

Gene Sequence

<dnaseqindica>1..139#549..625#730..778#1305..1389#1528..1780#3081..3401#ATGGGCAGCGGCGGCGGTGGCTGCGGCAGGAACGGCGCTGTGAGGCAGTACATCAGGTCCAAGGTGCCGAGGCTGAGGTGGACCGGGGAGCTCCACTGCAGCTTCGTCCAAGCCATCGAATTCCTCGGTGGCCAAGACAGTGCGTTTCTTCTTCTTGCTCCTGGCTACGTCCTCTTCATGCACGGCGTTTCATCGTGTATTTGTTTTTCTTTTCTCTGTGTGCATTCGTTGGTAGACTATTTTTCACCCTCTCCAGTCCATGCCTGCATTCCATAGCTATTTATTTCCAGGGATTGCTCTTCTTTCAGTTGTGACAGCCATGTTTTATGTTTCCCTCGGTTGTTAGTTTCTTTGATGTCGTCCTAGCTATAGCTTGTTCATGTTGATGTCTTCTTTTTTTCATGAGAGAACAACTTTCTCACAGTACCTTGAATTGTTTTCTGCCTTTCTTTTGCTTGTTACTCTTCGTCCTTTAGGAGTTTAGTATTTTTTTTTCCTAGCGATCTCTTCGTCAGGCTAACTTGTAAACTTGCTGGTTTGAATTGCAGAGGCTACACCTAAGCTCATTCTTCAGCTCATGGGGGTGAAGGGGCTGACCATATCTCATGTCAAGAGCCACCTCCAGGTTCTTATCCCTTCAGTCTCCTGCAGCCTTCTCTCTCTCTCTCTCTCCCAGAGAGCATGCAAATACAGAAATTCTGATTTTGTCCATTTATCCTTTTGAAACAGATGTACAGATGCTCCAGGCTCGTCTCCCATGGCACGGGAAGGAGATCAGGTGAGAGATGATTGTTTTTCTTCCATCATTACGTTATTTGGTTCTTCATCCTCCCAACGTCAGAGGTTTTAATTTGCCTCCCTGTTCCCTGGGGATACGAGATGATAGTAGTTGTGGCAGCAGTAGTTGTTTTTCTAGTGTTATTATGTCAACGCTTTTTGTTGTTTAGTTGGAGTACATTGGTTATAATATTCAGAGGAAAAAGAAGGCTCATGTCCACAGTAGAATGACCATCCAGTTTATTATTATTATTTTTTAACCAAATAGATGCCTTGTTGTTTGTGTGAGCTATTTTTCGGTGTTAATTATGTGGGGGCATCTCTAAACTCCCCTTGCCACATGCCTACTGCGCCATGCAACTAACCAGTCTTACCTTCTCATGGAGTCATGGGGTACCTTCATCATGCAAATCCTCTGTTCAAAAAGATAGGAAGATAGCTAGATATATGAGAAAAAGAAATTGTTGTTGCACACTTTAGATGTTGCTAATGGAAAGCCAAACCCCTTTCTTTCATTGTACCATCAGAGATGCAACCACAGCTGCAAAGGAAGCACTCATGTGGTGCTGATGAGCAAGTCCCCAGAGAATTCCTGTGCCCCCCTCTGAAAAGGTTTGGGCCTCAACTTTCCCAACTTTGAATTGTGTTCAAGTTAAAGACAAGCTTTTTGAAGGCCTAATCTTGACACAAAGTCACCTTTTCCCCTTGGGTGTCCATTTACTCTCTTTTTTGGGGTCTTTGGATGAACAGGACCAGGATGGGGACAGAAGCCACATACAAAGGCATGCAAGGAAGCCAAGGAATCAGTGAGATGAGGACTACTGGCACCCAGTACTGCATTGATGATTACATGCAAGCCATGGCAATGGAGAGGAGAATAAAGGAGGAGGGCCTCAGATGGCAGAGGGATGCTGCTGCTGCTGCTGCTGCTGCAGATGGTGGTGCTGCTGCTTCCAACCTCCAAACCGTGGGATGTTCGGTGCAAGAATCTGACCCCTTTAAGGTACATCAGCTGAAAAGAAAAGTTAAAAGAAACATTGGGAAAACTTAATCAAAAGTATCACATTCTCTTGGAATATTAACTGGTTTCACACGCTGACTTACTCATTCTATTCAACCATTTATAAATGGATCTACTGCAATTTAGCTAAGCTCCTACGTACACATTGCATTTGTCAATTTGCCATGCAATATATTAGATTTTTATATATATCTGTAGGGCCCACTTGTCATACATGGATTTGGTCAAGGCGGCAACAAAGTAGTTTGTAAAAAATATTTTTTATTGGGCTGTGCATGTTGTATTGTCTTGACCATACCTATATTTTCTATGTTCCTGATTTTGAATATCTTAGGTTGTTTGACTACTGTACAATCCGTATCCTGCTGCATTTTTAGAATTGTCAGTAAATGTTTGTTCCCTTTATCTTACTACATGTGCAAAACCCAGATAAGCTCATGAATACTTGTAGTAGTAATTTCAGAAGGACAAGGATGCACATGCACTGATATGAGAAGACTGCGAATATAGTCCTTAAAAGTTGAAACCCCCTGTCTTTAACAGTGATGACCCAAATAACTCCAGGCATTTACCTCACATCGCAGTAGTGATTTGTCATTTGTGGTAGTAGCGTTCTGCAGCCTTCAATTGAAAGCCTTCCATGTTGCACCCAGTAGAATTCATGCTGATAAAAGTGCAGACAGAATTAACCCAATTAAGACTTCACTGTGGTTTACCTGAGTCTGAAAAAACTGCTTATATCCTACGGCTTCTGGAACGCATCAATAGCGTAGATGTTGTACGTTACGGCACAGATCTGCCGATCCTTGTGATTTTACTGCAGCAAGGAAAACGATTTTCAGCAGGGTCAAGTCCTGGTAAAAGTTGCACGTTCAAGGAAATAAATTTGATAGTTACTGCATGCGTACTTCTCCTTAGGGCAGCCACAATGTTTGTCTATAGGCTCTCTACAAGAGATCCATGTCAGCATATTTTCCTACTTGAAAGAGATTAAATGAAGAGAGAGAGCAAAGCTATCTACTAACCTGGAGATAGTCTATAGAGAAAAACGAGGCAATGGATTAGAGAGCTATAGATACCCATGTAGACATACCATTGAAGTGGTTTACTATTAATCTAATCTATTGCTGAGATGTACATGTTTTATAGTAGCACCTTACTTTATCATTGCGGGTGCTCTTAGACCATACTGTCATCAATGCCCATTATCCTAAGACCATTTTTTGTCATCAATGAAGGAATTTAATCCATCTAAACTGTTGCTTTCATTGGTGTCGTGCAGATCATCAAACCAGAAGTGCACCATCTTGGTCCCGTGTTGAAGCTGCAATGCTCCAAGGTGGAGAACAGTGGATTCATCTCCAGCAGCACCGGCACGGCTGCAAGGGATCAACCGGAGCCGCCGCCGCTGGAGAAATGTTCGCTGTCACTCTCCCTCGGTCCAGACCCCAAATGCATGCCGGCGATCGCCTCGTCGCCGAGCGAAAGCAGCTGCATCCTCTCGTCGTCGTCCAGGAGCTTCAGCGACTGCTCCGGGAACTCAGGTTGTCTTGTTGCCCCGGGTGTGAACTTGGAACTCTCCATGTCCATCTGTGGATCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016936