BGIOSGA017120

From RiceWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA017120

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017120, complete gene.

LocusTag

OSIGBA0126B18.9

Ensembl Transcript ID

BGIOSGA017120-TA

Ensembl Protein ID

BGIOSGA017120-PA

Length

3052

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30156069..30159120

Sequence Coding Region

30156069..30156536,30156630..30156773,30157492..30157732,30158070..30158570,30158708..30159120

Genome Context

<gbrowseImage1> name=IndicaChromosome04:30156069..30159120 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:30156069..30159120 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCCTTCGGACGATAAGGCGCAGCTCTCAGGTTTGGCGCAATCAGAAGAATCGTCACTTGATGTGGATCACCAGTCATTTCCTTGTTCTCCATCAATCCAACCGGTTGCTTCTGGGTGCACACACACAGAGAACAGCGCAGCATACTTCTTATGGCCGACATCCAACCTACAGCATTGTGCAGCCGAGGGACGTGCAAACTACTTTGGAAACCTTCAGAAAGGATTGTTGCCAAGGCACCCTGGTCGGTTGCCCAAAGGTCAGCAAGCAAATAGCTTGCTTGACTTGATGACTATAAGAGCTTTCCATAGCAAGATATTGCGGCGTTTTAGCCTCGGGACAGCAGTGGGATTCCGCATCAGGAAAGGGGATCTAACAGATATCCCTGCAATCCTTGTCTTTGTTGCTCGCAAGGTTCATAAGAAGTGGCTTAATCCAGCACAATGTCTTCCTGCTATTCTTGAGGGTCCAGGAGGTGTTTGGTGTGATGTTGATGTTGTTGAATTTTCGTACTACGGTGCACCGGCTCAAACACCTAAAGAGCAAATGTTCAGTGAGCTTGTTGATAAGTTATGTGGCAGTGACGAATGTATTGGTTCAGGCTCTCAGGTTGCAAGCCATGAAACTTTTGGTACTTTGGGTGCAATTGTGAAACGGCGCACTGGCAACAAGCAGGTTGGTTTCCTCACTAACCGTCATGTCGCGGTTGACTTGGACTACCCTAATCAGAAGATGTTTCATCCATTACCACCCAATCTTGGGCCTGGCGTTTATCTTGGAGCTGTTGAAAGAGCAACTTCTTTCATCACAGATGACGTTTGGTATGGAATCTATGCTGGAACAAACCCAGAGACATTTGTACGAGCTGACGGTGCATTTATCCCATTTGCTGATGACTTTGACATTTCCACCGTCACGACTGTAGTTAGGGGAGTCGGTGACATTGGGGATGTCAAGGTTATAGATCTGCAGTGTCCGCTCAATAGCCTCATAGGGAGGCAAGTATGCAAAGTTGGCAGAAGCTCTGGTCACACAACTGGGACTGTGATGGCCTATGCCCTTGAGTACAATGACGAGAAAGGAATATGCTTCTTCACAGACATCCTTGTTGTTGGTGAGAACCGCCAAACATTTGATTTGGAAGGTGATAGCGGAAGCCTTATTATCCTGACTAGCCAAGATGGTGAGAAGCCGCGTCCAATTGGAATTATATGGGGTGGCACAGCAAATCGTGGGAGGTTGAAGCTTACAAGTGATCATGGCCCTGAAAACTGGACTAGTGGGGTTGATCTTGGCCGTCTACTCGACCGTCTGGAACTTGATATTATCATTACCAATGAATCACTCCAAGAATTTGCCTACTATAAAGATGCCGTGCAGCAGCAAAGATTTGCTTTGGTGGCCGCCGTTACCTCAGCTGTTGGGGAGTCTTCCGGGGCGCCTGTCGCCATCCCGGAAGAGAAGGTCGAAGAGATCTTCGAGCCATTGGGGATCCAAATCCAGCAACTGCCTCGCCATGACGTGGCGGCCTCTGGAACTGAAGGGGAGGAGGCATCCAACACGGTGGTCAATGTGGAAGAGCACCAGTTCATCTCAAACTTCGTCGGTATGTCGCCCGTGCGCGACGACCAAGACGCTCCGAGGAGCATCACCAACCTGAACAACCCCTCCGAGGAAGAACTCGCCATGTCGCTCCATCTGGGTGACCGAGAGCCCAAGCGGCTCCGTTCGGACTCCGGATCAAGCCTTGACCTGGAGAAATGA</cdnaseq>

Protein Sequence

<aaseq>MKPSDDKAQLSGLAQSEESSLDVDHQSFPCSPSIQPVASGCTHTENSAAYFLWPTSNLQHCAAEGRANYFGNLQKGLLPRHPGRLPKGQQANSLLDLMTIRAFHSKILRRFSLGTAVGFRIRKGDLTDIPAILVFVARKVHKKWLNPAQCLPAILEGPGGVWCDVDVVEFSYYGAPAQTPKEQMFSELVDKLCGSDECIGSGSQVASHETFGTLGAIVKRRTGNKQVGFLTNRHVAVDLDYPNQKMFHPLPPNLGPGVYLGAVERATSFITDDVWYGIYAGTNPETFVRADGAFIPFADDFDISTVTTVVRGVGDIGDVKVIDLQCPLNSLIGRQVCKVGRSSGHTTGTVMAYALEYNDEKGICFFTDILVVGENRQTFDLEGDSGSLIILTSQDGEKPRPIGIIWGGTANRGRLKLTSDHGPENWTSGVDLGRLLDRLELDIIITNESLQEFAYYKDAVQQQRFALVAAVTSAVGESSGAPVAIPEEKVEEIFEPLGIQIQQLPRHDVAASGTEGEEASNTVVNVEEHQFISNFVGMSPVRDDQDAPRSITNLNNPSEEELAMSLHLGDREPKRLRSDSGSSLDLEK</aaseq>

Gene Sequence

<dnaseqindica>1..468#562..705#1424..1664#2002..2502#2640..3052#ATGAAGCCTTCGGACGATAAGGCGCAGCTCTCAGGTTTGGCGCAATCAGAAGAATCGTCACTTGATGTGGATCACCAGTCATTTCCTTGTTCTCCATCAATCCAACCGGTTGCTTCTGGGTGCACACACACAGAGAACAGCGCAGCATACTTCTTATGGCCGACATCCAACCTACAGCATTGTGCAGCCGAGGGACGTGCAAACTACTTTGGAAACCTTCAGAAAGGATTGTTGCCAAGGCACCCTGGTCGGTTGCCCAAAGGTCAGCAAGCAAATAGCTTGCTTGACTTGATGACTATAAGAGCTTTCCATAGCAAGATATTGCGGCGTTTTAGCCTCGGGACAGCAGTGGGATTCCGCATCAGGAAAGGGGATCTAACAGATATCCCTGCAATCCTTGTCTTTGTTGCTCGCAAGGTTCATAAGAAGTGGCTTAATCCAGCACAATGTCTTCCTGCTATTCTTGAGGTGCGGAAACTTAATCTCCATTGTTGTTTGAATTTGGTTTGGGACGGTCTAAGTTTTTCTGCTAAATCTTTCACTTAGTTGGATCATTAACAGGGTCCAGGAGGTGTTTGGTGTGATGTTGATGTTGTTGAATTTTCGTACTACGGTGCACCGGCTCAAACACCTAAAGAGCAAATGTTCAGTGAGCTTGTTGATAAGTTATGTGGCAGTGACGAATGTATTGGTTCAGGCTCTCAGGTACTCGTGTTCTTTCCCTCTCTCTGTGTGTGTGTATGTGTGTGTGTTTGCAAAAATACCATGTGCATTAAGCACAGCATGCCATCATCTGCACAATAATTGTACAGGACAATACCATGTACTAGCAATTGTACCCTTCATGTTGTAAGGGGACCGTTCAAATTTGTCAAGATTCATCGCAAGATTTGCTAGTACAAAGTGGATAAATTTTCATGGCACTCTGAAGATTATGCCAAAAACTGACCGTTGGTTTGTTGGTTAGTCCTAACATCTAAGTTTGACCAGTTGAGCGGTGGCCACAGCTAGTTTGAATGCTACCAATGTTCATTACATCAAAGCAGATGATCTGATCGGAGATTGGAAGGAGTTTCTCCTTCTAAATCATATCATATCATTTGAGATACTGCATACTATATGTTGGTTCTTGTGCAGATTAAAGCTTCTGGATTTTACACAATCCTCCTACCGTTTACCAGTCAAACCTTTAACATTTTGCTGTGCTCTTTTTGTGAAATTTCAACTTAGTAATAATATTTTGTGACATGCACTCAAACTACATACTCCCTCCGTCCCAAAAAAATCCAACCTAGGATAGGACAACAAATCTGGACAAACACTTTGTCCAGATTCGCTGTGACCTATCCTAGGTTGTTCTTTTTTGGGACGGATGGAGTACTTCTGAAGCGTTCGTCCTTATAGTTCTGTTTCATTGTTTCAGGTTGCAAGCCATGAAACTTTTGGTACTTTGGGTGCAATTGTGAAACGGCGCACTGGCAACAAGCAGGTTGGTTTCCTCACTAACCGTCATGTCGCGGTTGACTTGGACTACCCTAATCAGAAGATGTTTCATCCATTACCACCCAATCTTGGGCCTGGCGTTTATCTTGGAGCTGTTGAAAGAGCAACTTCTTTCATCACAGATGACGTTTGGTATGGAATCTATGCTGGAACAAACCCAGGTAGAGCAGTTACAAATTAGCTGGTCAGGGCTTTATCTACAATTGTTTGTCTATTTAAAAACAATGTCTTAAGTAACATTAAAAGACACTTCAACTCACTGTATAAATATAAAAAATAAGTTTCCTGCTTCCTAGTTCCCATCATTCATATTAATGCCGGATTGCATTTTTTACTAGTTAGAAACAAATCAACATTTAGTTTTGATTGTAAAAAAAACATACTATGTTTGTGCTTTTCTGGTCATTTAACACATTTACCATTTTATTGATTATTCCAAATGATGTATATACCAGTCTAATTCCCAAACATATATGCCGCCCCATTATGGATTTGCAGAGACATTTGTACGAGCTGACGGTGCATTTATCCCATTTGCTGATGACTTTGACATTTCCACCGTCACGACTGTAGTTAGGGGAGTCGGTGACATTGGGGATGTCAAGGTTATAGATCTGCAGTGTCCGCTCAATAGCCTCATAGGGAGGCAAGTATGCAAAGTTGGCAGAAGCTCTGGTCACACAACTGGGACTGTGATGGCCTATGCCCTTGAGTACAATGACGAGAAAGGAATATGCTTCTTCACAGACATCCTTGTTGTTGGTGAGAACCGCCAAACATTTGATTTGGAAGGTGATAGCGGAAGCCTTATTATCCTGACTAGCCAAGATGGTGAGAAGCCGCGTCCAATTGGAATTATATGGGGTGGCACAGCAAATCGTGGGAGGTTGAAGCTTACAAGTGATCATGGCCCTGAAAACTGGACTAGTGGGGTTGATCTTGGCCGTCTACTCGACCGTCTGGAACTTGATATTATCATTACCAATGAATCACTCCAAGGTTGATTCTTTTCCCTCTATTCATTTGCATTCATCTTCAGATATTCCAGAAATACGTTGGACTATCCAATTTACTTGATGTTTTCATACTACTTTGTATTGAATCTGTACACTTTTGCTCCATTACAAAGCTGACAGAATTTGCCTACTATAAAGATGCCGTGCAGCAGCAAAGATTTGCTTTGGTGGCCGCCGTTACCTCAGCTGTTGGGGAGTCTTCCGGGGCGCCTGTCGCCATCCCGGAAGAGAAGGTCGAAGAGATCTTCGAGCCATTGGGGATCCAAATCCAGCAACTGCCTCGCCATGACGTGGCGGCCTCTGGAACTGAAGGGGAGGAGGCATCCAACACGGTGGTCAATGTGGAAGAGCACCAGTTCATCTCAAACTTCGTCGGTATGTCGCCCGTGCGCGACGACCAAGACGCTCCGAGGAGCATCACCAACCTGAACAACCCCTCCGAGGAAGAACTCGCCATGTCGCTCCATCTGGGTGACCGAGAGCCCAAGCGGCTCCGTTCGGACTCCGGATCAAGCCTTGACCTGGAGAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017120