BGIOSGA017204

From RiceWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA017204

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017204, complete gene.

LocusTag

OSJNBA0043L09.28

Ensembl Transcript ID

BGIOSGA017204-TA

Ensembl Protein ID

BGIOSGA017204-PA

Length

4892

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31290293..31295184

Sequence Coding Region

31290293..31290370,31290508..31290665,31290860..31290950,31291044..31291163,31291235..31291303
,31291423..31291514,31291647..31291749,31291830..31291937,31292018..31292080
,31292142..31292213,31292391..31292468,31292547..31292609,31292686..31292749
,31292886..31292971,31293524..31293637,31293828..31293905,31293980..31294051
,31294136..31294371,31294553..31294643,31294773..31294961,31295149..31295184

Genome Context

<gbrowseImage1> name=IndicaChromosome04:31290293..31295184 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:31290293..31295184 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAAAGGACGAGATTCGTAGGTTTGATTCATTTGAGGCGTTTGAAGAGATATGCTCATTAGCGGAGCAGAATAAGGTTGATTTTGTGCTACTTGGTGGTGACCTTTTCCATGAGAACAAACCTTCACGTTCAACCTTAGTTAAGACCATTGAGATTCTACGGCGTTACTGCTTGAATGACCAGCCAGTGAAGTTCCAGGTTGTCAGTGATCAGACAATCAACTTTCCAAACAGATTCGGCCAAGTAAATTATGAAGATCCAAACTTCAATGTTGGATTGCCTGTGTTCACTATCCATGGAAACCATGATGATCCAGCTGGTGTGGATAATCTCTCTGCAATTGATATTCTCTCAGCCTGCAATCTTGTAAATTATTTTGGGAAGATGGACCTTGGTAGCTCTGGTGTTGGTGAAATAGCAGTCTATCCTGTACTCGTAAAAAAGGGTACAACTTTTGTTGCGCTCTATGGCCTTGGAAACATTAGAGATGAACGATTAAACAGGATGTTTCAGACACCTCATGCTGTACAATGGATGCGACCTGAAACTCAAGATGGAATGTCAGTATCTGACTGGTTCAATATTCTTGTTCTTCATCAGAATAGGATAAAAACAAACCCTAAAAGCGCAATCAATGAGCATTTCTTACCACGTTTTCTGGACTTTATAGTATGGGGCCATGAGCATGAATGCCTTATTGATCCCCAGGAGGTACCTGGGATGGGTTTTCACATCACTCAACCAGGCTCATCAGTTGCAACCTCCCTGATTGATGGTGAAGCAAAACCAAAGCATGTTCTCTTGTTAGAAATCAAGGGAAACCAGTATAGGCCAACCAAAATACCTTTGAGATCCGTTAGGCCCTTTCACTATGCTGAGGTTGTGTTAAAAGATGAAGTGGATGTTGATCCCAATGATCAGGCCTCTGTTCTTGAACATTTGGATAAAATTGTAAGAAATCTTATTAAGAAGAGTAGTCAGCCAACAGCCAGTAGACCAGAGACCAAACTTCCACTAATTAGAATCAAGGTAGATTACTCTGGGTTTTCAACAATTAATCCACAACGATTTGGTCAGAAGTATGTCGGGAAGGTTGCAAACCCCCAGGATATTCTTATCTTCTCAAAATCAGCAAAAAAGCGTCAGACTACTGGAGTAGGCAATATTGATGACTCTGAGAAACTTCGTCCCGAGGAACTAAACCAACAAACTATTGAAGCTTTGGTTGCCGAAAATAACTTGAAAATGGAGATTCTTCCAGTTGATGACTTGGACATTGCATTGCATGATTTTGTGAGCAAGGATGACAAGATGGCGTTTTATGCCTGTTTGCAGCGGAATCTTGAAGAAACCAGAACTAAATTGAATTCGGAGGCAGATAAATTTAAAATAGAGGAAGAAGATATAATAGTCAAAGTTGGCGAGTGCATGCAGGAACGTGTGAAGGAAAGGTCCCTCCGCTCCAAGGAAGATTCACGGTTCACGTCAAGCTCTCAAAACTTGGTGGATACTGGAGGTAGATCTGTTACAGCTCAAAGTAACCTGAACTCTTTCAGTGATGATGAAGACACCAGGGAGATGCTTCTCGGTGCAAGAACAACTAATGCTGGAAGGAAAGCATCTGGATTTACAAGACCCTCTAAAGATGCTACCGATGTTGCCAAAACTGGAACTTCCAGAAGGGGCAGGGGAAGAGGGACGGCCTCAATGAAGCAGACCACTCTGAATTTCAGCCAATCAAGGTCAAGTGCTGCTATCCGCAGTGAGGAAGTGCAATCTTCTTCAGATGAGGAAAATGAGACTAATGAAGCAAACGAAGTTGTTGAATCTTCAGAACCGGAGGAGAGTCCCCAACAAACTGGACGGAAAAGGGCAGCTCCTAGAGGTGGTAGAGGTAGGGGTAGAGGCGCTACTGCAAAAAGGGGTAGAAAAGCAGATATTTCATCCATCCAGAGCATGCTGATGAGCAAAGATGATGATGACGATGATGAAGATGACAGGCCGAAGAAACCTCCACCTCGGGTCACTAGGAACTACGGAGCTGTTAGGAGGAGATGA</cdnaseq>

Protein Sequence

<aaseq>MEKDEIRRFDSFEAFEEICSLAEQNKVDFVLLGGDLFHENKPSRSTLVKTIEILRRYCLNDQPVKFQVVSDQTINFPNRFGQVNYEDPNFNVGLPVFTIHGNHDDPAGVDNLSAIDILSACNLVNYFGKMDLGSSGVGEIAVYPVLVKKGTTFVALYGLGNIRDERLNRMFQTPHAVQWMRPETQDGMSVSDWFNILVLHQNRIKTNPKSAINEHFLPRFLDFIVWGHEHECLIDPQEVPGMGFHITQPGSSVATSLIDGEAKPKHVLLLEIKGNQYRPTKIPLRSVRPFHYAEVVLKDEVDVDPNDQASVLEHLDKIVRNLIKKSSQPTASRPETKLPLIRIKVDYSGFSTINPQRFGQKYVGKVANPQDILIFSKSAKKRQTTGVGNIDDSEKLRPEELNQQTIEALVAENNLKMEILPVDDLDIALHDFVSKDDKMAFYACLQRNLEETRTKLNSEADKFKIEEEDIIVKVGECMQERVKERSLRSKEDSRFTSSSQNLVDTGGRSVTAQSNLNSFSDDEDTREMLLGARTTNAGRKASGFTRPSKDATDVAKTGTSRRGRGRGTASMKQTTLNFSQSRSSAAIRSEEVQSSSDEENETNEANEVVESSEPEESPQQTGRKRAAPRGGRGRGRGATAKRGRKADISSIQSMLMSKDDDDDDEDDRPKKPPPRVTRNYGAVRRR</aaseq>

Gene Sequence

<dnaseqindica>1..78#216..373#568..658#752..871#943..1011#1131..1222#1355..1457#1538..1645#1726..1788#1850..1921#2099..2176#2255..2317#2394..2457#2594..2679#3232..3345#3536..3613#3688..3759#3844..4079#4261..4351#4481..4669#4857..4892#ATGGAAAAGGACGAGATTCGTAGGTTTGATTCATTTGAGGCGTTTGAAGAGATATGCTCATTAGCGGAGCAGAATAAGGTTTGTAGGAGCTGCACATTTTTCCATTCTTTTCTGCTTGTGTTGCAAAATTTATTGGCCTGCTCATTCTGTTGGGGGATAACCTTCTATTTATGAATTATGAATTATAATATGATGGAAATCATACTGAATTGCAGGTTGATTTTGTGCTACTTGGTGGTGACCTTTTCCATGAGAACAAACCTTCACGTTCAACCTTAGTTAAGACCATTGAGATTCTACGGCGTTACTGCTTGAATGACCAGCCAGTGAAGTTCCAGGTTGTCAGTGATCAGACAATCAACTTTCCAAACAGGTTTTGACGATGAGTTATATCACTCTATCATGCCATTTTTTTCTTGAGTGTACTCTAAATTTGGTGATCCCTCAATGTAATCTTTCATAAAAGTGTCACTTTTGCTGAAATTTAGGTTTGATATATCATACGTGTATGCAGATATGCATTTTCCCCTTAATTTTCTTACATGAATTTTCTTGGTACAATCACAGATTCGGCCAAGTAAATTATGAAGATCCAAACTTCAATGTTGGATTGCCTGTGTTCACTATCCATGGAAACCATGATGATCCAGCTGGTGTGGTATGAGAATCTCGTTCTGACATTCTGTTATTATGGTTATTATGCTTATGATGGGTGCCAGCTTTTCTCATGCATTCTTGCCCCTCTCTGTAGGATAATCTCTCTGCAATTGATATTCTCTCAGCCTGCAATCTTGTAAATTATTTTGGGAAGATGGACCTTGGTAGCTCTGGTGTTGGTGAAATAGCAGTCTATCCTGTACTCGTAAAAAAGGTGCGCTACTTCAGCTGCAGGCAAACCATGAACTCTCACATGTTAATCCTCTGTTTTTCCTGTTATTTCAGGGTACAACTTTTGTTGCGCTCTATGGCCTTGGAAACATTAGAGATGAACGATTAAACAGGATGTTTCAGGTGCATTTCCATCGACTTTTCTAAGAATTTGAAGTTAATTCGCAACTTGGCAGCACTAGAGCAAGAAACTTTCTTGATCATTTGAACATTGATATCATATTTTTATATCAATTATTCAGACACCTCATGCTGTACAATGGATGCGACCTGAAACTCAAGATGGAATGTCAGTATCTGACTGGTTCAATATTCTTGTTCTTCATCAGAATAGGTATGGGCGGTGAATGAATGGTGACAAACTGTAGTGGAATGTCAGTATCTGACTGGTTCAATATTCTTGTTCATTTTTTTATAATCTTCATGCCGCTTACTGAAAAGAAAATTGAAACCTGAAATCATACAGGATAAAAACAAACCCTAAAAGCGCAATCAATGAGCATTTCTTACCACGTTTTCTGGACTTTATAGTATGGGGCCATGAGCATGAATGCCTTATTGATCCCCAGGTAATGACTTGGATTTTATTTGATTTCTTTTTTAAAAAATAACGTGAATATGCACTTGTCATATGATCAATTGTTTATAGGAGGTACCTGGGATGGGTTTTCACATCACTCAACCAGGCTCATCAGTTGCAACCTCCCTGATTGATGGTGAAGCAAAACCAAAGCATGTTCTCTTGTTAGAAATCAAGGTCCTATTGAAAGCTCTCCTCTTCATGTTGAACAAAACTTCAGTTTGGTGTTTTCTCATTCCATTTTTATTCTTAAACAGGGAAACCAGTATAGGCCAACCAAAATACCTTTGAGATCCGTTAGGCCCTTTCACTATGCTGAGGTATGATACCCCTCATTTCATGCTTATTTCAGTGCTTGGGTCTCACTGTCCTAATATATAGGTTGTGTTAAAAGATGAAGTGGATGTTGATCCCAATGATCAGGCCTCTGTTCTTGAACATTTGGATAAAATTGTGAGTTTTCAGTTTTCCATGATTTGTTATAATCTTTTCCATTTTATTGAGAAGCATGGTGGCATGCTGGTGTGGAATTGGTTCAACATTGGCTTATTTGCCCGTTTGTTGTCAGTCTAGTTTTCTTTGTTGAATGAAGTCGTTAACCCTCAATCTCATAATACTCAATTGTTTCAGGTAAGAAATCTTATTAAGAAGAGTAGTCAGCCAACAGCCAGTAGACCAGAGACCAAACTTCCACTAATTAGAATCAAGGTAAAAAAAACAGAAGAGATGTACTCCGCACAAATTAATCAAGACAGGAACAATGAAAGTGCTCATATTGTTCTGTAGGTAGATTACTCTGGGTTTTCAACAATTAATCCACAACGATTTGGTCAGAAGTATGTCGGGAAGGTATCTGAGTCCCTAATTAGGTTCTTACTCAGAATTCTTACCTGAATGAGCTTATTTGATAGCTTCTTGTTGTAAGGTTGCAAACCCCCAGGATATTCTTATCTTCTCAAAATCAGCAAAAAAGCGTCAGACTACTGGAGGTATTCCTTTATGTTTAAGAAAGACAGTGCACAAGTTATTTACATAGTGGCAGAATGCATCAAGCTATGAGGAGCAACAGATGCCATGTTATTCTGACTTTTTTGTTTAACTGACTATGTCTATGTATATATACAGTAGGCAATATTGATGACTCTGAGAAACTTCGTCCCGAGGAACTAAACCAACAAACTATTGAAGCTTTGGTTGCCGAAAATAACTTGGTACTTCTTGAAACTACATATTCTGTATTATTTTGCAGTTTTGCTCTTCTCCTAGGAGAAATAATTGCTGCTATCTGTTTTTCTTGATGGGATTCCATTTAGTTGTATATATGATGATCATAAATGTAAAACAAAGATCTTGCCTTTTTCCTATACTGCCTTATGCACTAAATGGATGGTAATGTGTTTATTCTTGACTCCTACAGTATTAGGCTGAAATATAATTAAATTTTCAGAAATATAATGGCAAGAAAGGTACTTCTGGCTAGGAGGCCCATTATGGTAGCTATTGAATAACAGCCAATAATTTAATGAGCGACATCTCTATCTGGTCCCATTACACTTCACCATATGAGCTTTTTACAATAATAGCCTGAGACTAACAGTGGTACTGTGAAACAAGGACTATTTAATTGTCTTAGTTGGGTTTGTGGGTCTGGAATTCCTGATTTTGTTCTATAGATTCTTTGGATAGCTTCTTACATCCTTCTTTTTTTAAAAAAAAATATTAGAGTAACAATATAAGCTTCATGACACAAATCTTGTTTCCAGAAAATGGAGATTCTTCCAGTTGATGACTTGGACATTGCATTGCATGATTTTGTGAGCAAGGATGACAAGATGGCGTTTTATGCCTGTTTGCAGCGGAATCTTGAAGAAACCAGAGTATGCTTTGCTACATTTTCTATTGTTGGTTTTAGTTCTTTTTTTTTATCAAAGGGCCGTAGTTCTCCATTTCCATTAATAGAAATGAGACTAGAATACAGAGGTAGCCTTTTTTAGTTCTTATTTGATTGCTTGCTGCCTGATAAAATTGCATGCATCTAAAATTGAAATCCTTTGTTGAAACCTGCAGACTAAATTGAATTCGGAGGCAGATAAATTTAAAATAGAGGAAGAAGATATAATAGTCAAAGTTGGCGAGTGCATGCAGGTATTTGGAGCAATCTACTATTGTTCCTATGAGGTTGTGGGGTGATTAAAAGGTTAATATTTTTAACTACTTAGGAACGTGTGAAGGAAAGGTCCCTCCGCTCCAAGGAAGATTCACGGTTCACGTCAAGCTCTCAAAACTTGGTGGTTTCAATGTCCTTATGCCCTTAATGTTGTATGCCATTTTTTCATTGTTGCTGATTGTTTGTTGCTCTTATGATACTTGACCAGGATACTGGAGGTAGATCTGTTACAGCTCAAAGTAACCTGAACTCTTTCAGTGATGATGAAGACACCAGGGAGATGCTTCTCGGTGCAAGAACAACTAATGCTGGAAGGAAAGCATCTGGATTTACAAGACCCTCTAAAGATGCTACCGATGTTGCCAAAACTGGAACTTCCAGAAGGGGCAGGGGAAGAGGGACGGCCTCAATGAAGCAGACCACTCTGAATTTCAGCCAATCAAGGTTATTAAATTAATTGCTACCTTGCATTTATACCATAACTGTGCAACCTATGCCAAAATGGAATAGCCATGGTACAGTCTAATTTGCATTTTGAGTGTTAAAGGTGTTTGAAATCGTGTGCCCTGGTTTTAACTCTGCAGTAGGTGCTCCAATGCTAATTTTACCATCCAATATTTTGCAGGTCAAGTGCTGCTATCCGCAGTGAGGAAGTGCAATCTTCTTCAGATGAGGAAAATGAGACTAATGAAGCAAACGAAGTTGTTGAATCTTCAGTATGATCATTTCCTCTATTTGTAGTTATGTACTTTTTCTGTATTAATACGCATAAATATAATGTGCGCTTTTGCTCGTGGCAAATGACCTGGTGAACTGAAACATTGTATATTCTTGAATACTCACAGGAACCGGAGGAGAGTCCCCAACAAACTGGACGGAAAAGGGCAGCTCCTAGAGGTGGTAGAGGTAGGGGTAGAGGCGCTACTGCAAAAAGGGGTAGAAAAGCAGATATTTCATCCATCCAGAGCATGCTGATGAGCAAAGATGATGATGACGATGATGAAGATGACAGGCCGAAGAAACCTCCACCTCGGGTAAGTGAATCACCTTGACATTTTGTCAGTTTGACGGGTCTTCTTGTGGTTTGTCATTAAATTGTTTGCATTGTGTTGTGTACACGCACTGATACTACAAACCGTTGGTTTTACGACATACAAACTGTTTTTTTTTTAGAATACGACCTACAAACTGTTGGTTTTACGACTTTGTGTTACTCTGCAGGTCACTAGGAACTACGGAGCTGTTAGGAGGAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017204