Os05g0277000

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Annotated Information

Function

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence

Subcellular location: Secreted › cell wall

By similarity. Membrane; Peripheral membrane protein

Sequence similarities: Belongs to the expansin family. Expansin A subfamily.Contains 1 expansin-like CBD domain.Contains 1 expansin-like EG45 domain.

Protein name

Os05g0277000 protein

Protein sequence

2HCZ_X 148 IVFHIEKG.[2].PNYLAVLVKYVADDGDIVLMEIQ.[2].L S A.[1].WKPMKLSWGAIWRMD.[1]. 202 query 156 IRFTISGR DYFELVTVFNVGGSGVVAQVSIK.[2].K T D WMAMSRNWGQNWQSN 206 gi 20138021 157 VRFTMRGQ GNFNMVMISNVGGGGSVRSVAVR G S.[2].K.[1].WLQMTRNWGANWQSS 208 gi 20138096 162 MRFTINGR NYFELVLISNVAGGGEISKVWIK G S.[2].N.[1].WETMSRNWGANYQSN 213 gi 75244809 158 IRFTINGK NYFELVLIANVGGSGVVSGAWIK G S.[2].Q WMAMSRNWGMNWQSN 208 gi 75223466 157 MRFTINGN DYFELVTVANVGGSGVVSQMWIK G F.[2].D WMVMSRNWGASWQSN 207 gi 75263195 162 VKFAINGH NYFELVNVFNVGGSGVVTGLWIK G S.[2].D WLVMSRNWGANWQSN 212 gi 75267715 164 VRFTINGR NYFELLMISNVGGAGSVQSVQIK G S.[2].N WMTMSRNWGANWQSN 214 gi 115450129 220 VTFHVEQG.[2].PVYMAILVEYENGDGDVVQVDLM.[2].R.[10].T G.[1].WTPMRESWGSIWRLD 283 gi 125551519 160 LTFAVDAG.[2].PSYFAVLVKYENGDGDLSGMDLM.[2].G A G.[2].WTPMQQSWGAVWKLS 214 2HCZ_X 203 A KALKGPFSIRLTS.[3].KKVIAKDVIP 229 query 207 A YLNTQSLSFKVKL.[3].REVTVWNIAP 233 gi 20138021 209 G DLRGQRLSFKVTL.[3].KTQTFLNVVP 235 gi 20138096 214 T YLNGQSLSFKVQL.[3].SIKAALNVVP 240 gi 75244809 209 A YLTGQSLSFRVQT.[3].KVKTAYDVAP 235 gi 75223466 208 A YLNSQSISFRVQT.[3].RVITADNVAP 234 gi 75263195 213 A YLNGQGLSFRVQL.[3].RQVTATNVAP 239 gi 75267715 215 A YLNGQPLSFKVTT.[3].VTKTFLNAIS 241 gi 115450129 284 T.[1].HPLQGPFSLRITN.[3].KTLIADQVIP 311 gi 125551519 215 A.[1].AALQAPLSIRLTS.[3].KTLVASNVIP 242

This family contains allergens lol PI, PII and PIII from Lolium perenne.

Evolution

Please input evolution information here.

Labs working on this gene

1National Institute of Agrobiological Sciences, Ibaraki 305-8602, Japan, 2Biological Information Research Center, National Institute of Advanced Industrial Science and Technology, Japan, 3Japan Biological Informatics Consortium, Tokyo 135-0064, Japan, 4Okayama University Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, Innovation Center Okayama for Nanobio-targeted Therapy, Okayama 5 700-8558, Japan, Department of Biological Sciences, Tokyo Metropolitan University, Tokyo 192-0397, Japan, 6Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems, Shizuoka 411-8540, Japan, 7Institute of Botany, Academia Sinica, Taipei 11529, Taiwan, 8Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200233, China, 9Cold Spring Harbor Laboratory, NY 11723, USA, 10European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD, UK, 11Graduate School of Information Science and Technology, Hokkaido University, Hokkaido 060-0814, Japan, 12Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India, 13National Research Centre on Plant Biotechnology, Indian Agricultural Research Institute, New Delhi 110012, India, 14Institute for Bioinformatics/ MIPS, GSF National Research Center for Environment and Health, D-85764 Neuherberg, Germany, 15Institute of the Society for Techno-innovation of Agriculture, Forestry and Fisheries, Ibaraki 305-0854, Japan, 16Crop Research Informatics Laboratory, International Rice Research Institute, Metro Manila, Philippines, 17Department of Biology, McGill University, Quebec H3A 1B1, Canada, 18Tsukuba Division, Mitsubishi Space Software Co., Ltd., Ibaraki 305-0032, Japan, 19Centre for Comparative Genomics, Murdoch University, Western Australia 6150, Australia, 20Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan, 21National Center for Biotechnology 12 Information, National Institutes of Health, MD 20894, USA, 22Pohang University of Science and Technology, Pohang 790-784, Korea, 23RIKEN BioResource Center, RIKEN Tsukuba Institute, Ibaraki 305-0074, Japan, 24Waksman Institute of Microbiology, Rutgers University, NJ 08854, 25Stanford University Medical Center, CA 94305-5120, USA, 26Swiss-Prot Group, Swiss Institute of Bioinformatics, Geneva 1206, Switzerland, 27Arizona Genomics Institute, The University of Arizona, AZ 85721, USA, 28University of Delaware, DE 19711, USA and 29University of Perpignan, UMR CNRS-IRD 5096, Perpignan 66860, France

References

1.The Rice Annotation Project Database (RAP-DB): 2008 update. Rice Annotation Project, et al. Nucleic Acids Res, 2008 Jan.

2. Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana. Rice Annotation Project, et al. Genome Res, 2007 Feb.

3. The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information. Ohyanagi H, et al. Nucleic Acids Res, 2006 Jan 1.

4. The map-based sequence of the rice genome. International Rice Genome Sequencing Project. Nature, 2005 Aug 11.