RiceWiki:Databases

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Database Description Link Last update
RAP-DB An Integrative and Interactive Database for Rice Genomics http://rapdb.dna.affrc.go.jp 2013
MSU Rice Database The MSU Rice Genome Annotation Project Database and Resource http://rice.plantbiology.msu.edu 2013
RefSeq NCBI Reference Sequence Database http://www.ncbi.nlm.nih.gov/refseq/ 2013
RGKbase An annotation database for rice comparative genomics and evolutionary biology http://rgkbase.big.ac.cn/RGKbase/ 2013
Rice Gene Bank Rice Gene Bank (in Chinese) http://www.ricedata.cn/gene/ 2013
BGI-RIS BGI Rice Information System http://rice.genomics.org.cn 2010
OsGDB A sub-project of PlantGDB http://www.plantgdb.org/OsGDB/ 2012
Gramene A curated, open-source, data resource for comparative genome analysis in the grasses http://www.gramene.org 2013
Oryzabase A comprehensive rice science database http://www.shigen.nig.ac.jp/rice/oryzabaseV4/ 2013
DRTF The Database of Rice Transcription Factors http://drtf.cbi.pku.edu.cn/ 2006
RKD The rice kinase database http://phylomics.ucdavis.edu/kinase/ 2010
RiceGE Rice Functional Genomic Express Database http://signal.salk.edu/cgi-bin/RiceGE5 2010
RMD Rice Mutant Database http://rmd.ncpgr.cn/ 2007
RiceXPro The Rice Expression Profile Database http://ricexpro.dna.affrc.go.jp/ 2012
Gene Expression Omnibus (GEO) NCBI archive of expression data http://www.ncbi.nlm.nih.gov/geo/ 2013
TAIR The Arabidopsis Information Resource http://www.arabidopsis.org/ 2013
GtRNAdb The genomic tRNA database http://lowelab.ucsc.edu/GtRNAdb/Osati/ 2001