Difference between revisions of "Os03g0142800"
(Created page with "{{JaponicaGene|
GeneName = Os03g0142800|
Description = Similar to MRP-like ABC transporter|
Version = NM_001055469.1 GI:115450666 GeneID:4331585|
Length = 6579 bp|
Defini...") |
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| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0142800| | GeneName = Os03g0142800| | ||
Revision as of 19:28, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0142800 |
|---|---|
| Description |
Similar to MRP-like ABC transporter |
| Version |
NM_001055469.1 GI:115450666 GeneID:4331585 |
| Length |
6579 bp |
| Definition |
Oryza sativa Japonica Group Os03g0142800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:2346192..2352770 |
| Sequence Coding Region |
2346781..2348823,2348898..2349218,2349301..2349387,2349580..2350257,2350349..2350513 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:2346192..2352770 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:2346192..2352770 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccgcacttcccgaacctcccgctcccggaggctgccgccgccgccgcgcacgccgcgctgctcgccctcgccctgctcctgctcctcctccgctccgcgcgcgccctcgcctcgcgctgcgcgtcatgcctcaagaccgccccgcgccgagccgcggcggtcgacggggggctcgccgccgcgtcgtccgtgggcgcgtggtacagggcggcgctggcgtgctgcggctacgccctgctggcgcaggtcgccgccctgagctacgaggtcgcggtggccggttctcatgtcgccgtggaggccctgctgctgcccgcggtgcaggcgctggcgtgggcggcgctcctggcgctcgcgatgcaggcccgggccgtcgggtggggcaggttccccgtactggtgcgcgtctggtgggtggtctccttcgtgctctgtgttggcatcgcgtacgacgataccaggcacctcatgggcgatgatgatgatgatgaggtggactacgctcacatggttgccaacttcgcgtcggcgccggccctcgggttcctctgcttggttggtgtcatgggttccaccggtgttgaattggagttcaccgacgacgacagcagtgttcatgaaccgctcttgctcggtgggcagcggagagacgccgacgaggagcccgggtgcttgcgggtgacgccgtatggcgatgctgggattgttagccttgcaacattatcatggcttagtccgctgctgtcagttggtgcgcagcgaccacttgagctggctgacatacccttgatggcacacaaagaccgtgccaaatcctgctacaaggcgatgagcagtcactatgaacgccagcggatggagcgccccggcagcgaaccatcactggcatgggcaatattgaagtcgttctggcgtgaggcagcgatcaatggtgctttcgcagcggtgaacacaattgtctcctatgttggcccatacctgatcagctactttgtggactacctcagtggcaaaattgaattcccccatgaaggttacatccttgcctctgtattttttgtagcaaagttacttgagacgctcactgctcggcagtggtacttgggcgtggatgtcatggggatccatgtcaagtctgggctgacggccatggtgtacaggaagggccttaggctgtcgaattcctcgcggcagagccacaccagtggtgagattgtgaattacatggcggttgatgtacagcgtgtgggggactatgcatggtactttcatgacatctggatgcttccactgcagatcatcctcgccctcgccatcctgtacaagaatgttggaatcgccatggtttcaacattggtagctactgtattatcaattgctgcctcagttcctgtggcgaagctgcaggagcactaccaagataagcttatggcctcaaaggatgagcgcatgcgcaagacatcagagtgcctgaagaatatgaggattttgaagctccaagcgtgggaggatcgatacaggctgaagttggaagagatgagaaatgtggaatgcaagtggcttcggtgggctctgtattcacaggccgcagttacatttgttttctggagttcaccaatctttgtcgccgtgataacatttgggacttgtatattgcttggtggcgaactcactgctggaggtgttctttctgctttagcaacatttaggatccttcaagaaccacttaggaatttcccagatcttatctctatgattgctcagacgagggtatctttggaccggttgtctcactttcttcaacaagaagaattgccagatgatgcaactataacggttccacatggtagtacagataaggcaatcaatataaatgatgctacattctcttggaacccatcttctccaacccctacactttctggcatcaaccttagtgtggtgaggggtatgcgagtagcagtgtgtggtgtcattggttctggcaaatcaagcttgttgtcttctatactcggcgagatacccaaattgtgtggtcaagtgaggatcagtggatcagcagcatatgtccctcagactgcctggatacagtccggaaacattgaggagaacattctttttggcagtccaatggacaaacagcgttacaagagagttattgaggcttgctccctgaagaaagatcttcagttgctccaatatggagatcagaccatcatcggtgataggggcattaatttgagtgggggtcagaaacaaagagtacagcttgcaagagcactataccaagatgctgatatttatttgctcgatgatcccttcagtgcggttgatgctcatactgggagtgaattatttagggaatatatattgactgcactagcaagcaagaccgtaatttatgtaacccatcaaattgagtttctaccagctgctgacttgatactggttcttaaggatggtcatatcacccaagctggaaaatatgatgatcttctccaagctggcactgatttcaatgctttggtttgtgctcataaggaagctattgagaccatggaattttccgaagattccgatgaggatactgtctcttctgttcctatcaaaagactgacgccaagtgttagcaatatagataatctgaaaaacaaggtgtccaataatgaaaaaccatctagtacgcgtggaataaaagaaaagaagaagaagcctgaagagcgtaagaagaagcggtctgttcaagaggaggagagggagcgaggaagggttagcttacaggtttacttgtcatacatgggagaagcatacaaaggtacactgatacccctcattatcctggcccaaaccatgtttcaagtacttcagattgcgagtaactggtggatggcatgggcaaacccacaaacagaaggagatgcacctaagacagacagtgtggttctcttggttgtttatatgtcccttgcctttgggagttcattgtttgtgtttgtgagaagtcttcttgtggctacatttggtttagcaactgcacagaagctgtttgtaaagatgctaaggtgtgtttttcgagcgccaatgtcattctttgatactacaccatctggtcgaattttgaaccgagtttctgtagatcaaagtgtcgtggaccttgatatagcattcagacttggtggatttgcatcaacaacaattcaactacttggaattgttgctgtcatgagcaaagtcacatggcaagttttgattcttatagttcctatggctgttgcatgcatgtggatgcagagatattatattgcttcatcaagggaattgactaggatcttaagcgtacagaagtcgccggtgatccatttgtttagtgagtcaattgctggtgctgctacaatcagaggttttggtcaagagaaacgattcatgaaaagaaatctttaccttcttgactgttttgctcggcctctattttccagcctggcagctattgaatggctgtgcctgcgaatggaattgctctcgacctttgtcttcgctttttgcatggcgatactagtgagcttccctcctggcacaattgaaccaagtatggctgggcttgctgtcacttatggacttaatttaaatgctcgcatgtcaaggtggatactgagcttctgtaaattagagaatagaatcatctctgttgaacgcatttatcagtattgcaagcttcccagtgaagcaccactcatcattgagaatagccgtccctcatcctcgtggcctgagaatggaaacattgagctggtcgatctcaaggtacggtacaaagatgacctgcccttagttctacatggaatcagttgtatatttcccggtggaaaaaagattgggattgtggggcgaactggaagtggtaaatctactcttattcaggcccttttccgcttaattgaacctacaggagggaaagttatcatcgatgacgtcgatatttctagaattggcctgcatgatctgcggtcacggttgagcatcattccccaggaccctacgttgtttgagggtactatcagaatgaatcttgatcctcttgaagaatgtactgatcaggaaatttgggaggcactagaaaagtgtcagctcggagaggtcattcggtccaaggatgaaaagctggacagtccagtactggagaatggagataactggagtgtgggacaacgccagcttattgcattgggtagggccctgctgaaacaggcaaaaattttggtgcttgacgaggcaacagcatcagttgacacagctacggacaatcttattcaaaagattattcgcagtgaattcaaggattgcacggtctgcaccattgcacaccgtatcccgacggttattgatagtgacctagtcctggtgcttagtgatggtaaaattgcagagtttgacacaccccagaggctcttggaggacaagtcctccatgttcatgcagctagtatctgaatactcaactcggtcaagctgtatatag</cdnaseq> |
| Protein Sequence |
<aaseq>MPHFPNLPLPEAAAAAAHAALLALALLLLLLRSARALASRCASC LKTAPRRAAAVDGGLAAASSVGAWYRAALACCGYALLAQVAALSYEVAVAGSHVAVEA LLLPAVQALAWAALLALAMQARAVGWGRFPVLVRVWWVVSFVLCVGIAYDDTRHLMGD DDDDEVDYAHMVANFASAPALGFLCLVGVMGSTGVELEFTDDDSSVHEPLLLGGQRRD ADEEPGCLRVTPYGDAGIVSLATLSWLSPLLSVGAQRPLELADIPLMAHKDRAKSCYK AMSSHYERQRMERPGSEPSLAWAILKSFWREAAINGAFAAVNTIVSYVGPYLISYFVD YLSGKIEFPHEGYILASVFFVAKLLETLTARQWYLGVDVMGIHVKSGLTAMVYRKGLR LSNSSRQSHTSGEIVNYMAVDVQRVGDYAWYFHDIWMLPLQIILALAILYKNVGIAMV STLVATVLSIAASVPVAKLQEHYQDKLMASKDERMRKTSECLKNMRILKLQAWEDRYR LKLEEMRNVECKWLRWALYSQAAVTFVFWSSPIFVAVITFGTCILLGGELTAGGVLSA LATFRILQEPLRNFPDLISMIAQTRVSLDRLSHFLQQEELPDDATITVPHGSTDKAIN INDATFSWNPSSPTPTLSGINLSVVRGMRVAVCGVIGSGKSSLLSSILGEIPKLCGQV RISGSAAYVPQTAWIQSGNIEENILFGSPMDKQRYKRVIEACSLKKDLQLLQYGDQTI IGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREYILTALASK TVIYVTHQIEFLPAADLILVLKDGHITQAGKYDDLLQAGTDFNALVCAHKEAIETMEF SEDSDEDTVSSVPIKRLTPSVSNIDNLKNKVSNNEKPSSTRGIKEKKKKPEERKKKRS VQEEERERGRVSLQVYLSYMGEAYKGTLIPLIILAQTMFQVLQIASNWWMAWANPQTE GDAPKTDSVVLLVVYMSLAFGSSLFVFVRSLLVATFGLATAQKLFVKMLRCVFRAPMS FFDTTPSGRILNRVSVDQSVVDLDIAFRLGGFASTTIQLLGIVAVMSKVTWQVLILIV PMAVACMWMQRYYIASSRELTRILSVQKSPVIHLFSESIAGAATIRGFGQEKRFMKRN LYLLDCFARPLFSSLAAIEWLCLRMELLSTFVFAFCMAILVSFPPGTIEPSMAGLAVT YGLNLNARMSRWILSFCKLENRIISVERIYQYCKLPSEAPLIIENSRPSSSWPENGNI ELVDLKVRYKDDLPLVLHGISCIFPGGKKIGIVGRTGSGKSTLIQALFRLIEPTGGKV IIDDVDISRIGLHDLRSRLSIIPQDPTLFEGTIRMNLDPLEECTDQEIWEALEKCQLG EVIRSKDEKLDSPVLENGDNWSVGQRQLIALGRALLKQAKILVLDEATASVDTATDNL IQKIIRSEFKDCTVCTIAHRIPTVIDSDLVLVLSDGKIAEFDTPQRLLEDKSSMFMQL VSEYSTRSSCI</aaseq> |
| Gene Sequence |
<dnaseqindica>590..2632#2707..3027#3110..3196#3389..4066#4158..4322#4497..4791#4939..5153#5243..5548#5627..5690#5784..6023#6141..6244#gtgatcaagccatcaaaccacacaccacccagcgtcacacgcctgacttcatcatcctcctctcctcctcctccgcgaccttccttccttcccttccccttgtgccgcccccagccaaaattcactcgctcgccgccacacatcgatccacccatccgcccccgcaatcccccacgcggcgcgtcacctaccaccgcatctccacgggcgcggaggttgagggagttggtgagaggagatcagagcagcatcctcggagagcccgcccgccgcccgcattaggattcattaggatttaggactcggtgcttgcattttagcagaagaaatcttgtcaaatcctaatctctttctcgctcgacgaggaggtgaggtgaggtgggagagctagcgaacaaaggcttggtttggtgccatctggcggctccgatggcgtaacccgccgccgccctcagagctcggcctttgcctgccttgcctgccttctgccccgccgccccctgccctctgccgtggcgtggcgaggcccaatgccttttaaaccccgccccgctgccatcctgacgcccccgatccccaccgcctcccaatgccgcacttcccgaacctcccgctcccggaggctgccgccgccgccgcgcacgccgcgctgctcgccctcgccctgctcctgctcctcctccgctccgcgcgcgccctcgcctcgcgctgcgcgtcatgcctcaagaccgccccgcgccgagccgcggcggtcgacggggggctcgccgccgcgtcgtccgtgggcgcgtggtacagggcggcgctggcgtgctgcggctacgccctgctggcgcaggtcgccgccctgagctacgaggtcgcggtggccggttctcatgtcgccgtggaggccctgctgctgcccgcggtgcaggcgctggcgtgggcggcgctcctggcgctcgcgatgcaggcccgggccgtcgggtggggcaggttccccgtactggtgcgcgtctggtgggtggtctccttcgtgctctgtgttggcatcgcgtacgacgataccaggcacctcatgggcgatgatgatgatgatgaggtggactacgctcacatggttgccaacttcgcgtcggcgccggccctcgggttcctctgcttggttggtgtcatgggttccaccggtgttgaattggagttcaccgacgacgacagcagtgttcatgaaccgctcttgctcggtgggcagcggagagacgccgacgaggagcccgggtgcttgcgggtgacgccgtatggcgatgctgggattgttagccttgcaacattatcatggcttagtccgctgctgtcagttggtgcgcagcgaccacttgagctggctgacatacccttgatggcacacaaagaccgtgccaaatcctgctacaaggcgatgagcagtcactatgaacgccagcggatggagcgccccggcagcgaaccatcactggcatgggcaatattgaagtcgttctggcgtgaggcagcgatcaatggtgctttcgcagcggtgaacacaattgtctcctatgttggcccatacctgatcagctactttgtggactacctcagtggcaaaattgaattcccccatgaaggttacatccttgcctctgtattttttgtagcaaagttacttgagacgctcactgctcggcagtggtacttgggcgtggatgtcatggggatccatgtcaagtctgggctgacggccatggtgtacaggaagggccttaggctgtcgaattcctcgcggcagagccacaccagtggtgagattgtgaattacatggcggttgatgtacagcgtgtgggggactatgcatggtactttcatgacatctggatgcttccactgcagatcatcctcgccctcgccatcctgtacaagaatgttggaatcgccatggtttcaacattggtagctactgtattatcaattgctgcctcagttcctgtggcgaagctgcaggagcactaccaagataagcttatggcctcaaaggatgagcgcatgcgcaagacatcagagtgcctgaagaatatgaggattttgaagctccaagcgtgggaggatcgatacaggctgaagttggaagagatgagaaatgtggaatgcaagtggcttcggtgggctctgtattcacaggccgcagttacatttgttttctggagttcaccaatctttgtcgccgtgataacatttgggacttgtatattgcttggtggcgaactcactgctggaggtgttctttctgctttagcaacatttaggatccttcaagaaccacttaggaatttcccagatcttatctctatgattgctcagacgagggtatctttggaccggttgtctcactttcttcaacaagaagaattgccagatgatgcaactataacggttccacatggtagtacagataaggcaatcaatataaatgatgctacattctcttggaacccatcttctccaacccctacactttctggcatcaaccttagtgtggtgaggggtatgcgagtagcagtgtgtggtgtcattggttctggcaaatcaagcttgttgtcttctatactcggcgagatacccaaattgtgtggtcaagtaagtaaatgtatacattattggtgttaaaatgcacggtagttttgttacattttcccctaactcctttccaggtgaggatcagtggatcagcagcatatgtccctcagactgcctggatacagtccggaaacattgaggagaacattctttttggcagtccaatggacaaacagcgttacaagagagttattgaggcttgctccctgaagaaagatcttcagttgctccaatatggagatcagaccatcatcggtgataggggcattaatttgagtgggggtcagaaacaaagagtacagcttgcaagagcactataccaagatgctgatatttatttgctcgatgatcccttcagtgcggttgatgctcatactgggagtgaattatttagggttggtactcattgttgcctattccatctatttcaaaagtttttttttccattgcataacatcccaagcttctgtgttacaggaatatatattgactgcactagcaagcaagaccgtaatttatgtaacccatcaaattgagtttctaccagctgctgacttgatactggtaactacattcttctcacaatctgaatatgttgtaatcatttatgcacaagagtatttccatcagaattaactatacaggcagattctgtataaaagcaagttatttttagttatagttttcatgagactatgcatgatcataggggcctggattgatgtctctttattcttctatattgtgcacgtgcaggttcttaaggatggtcatatcacccaagctggaaaatatgatgatcttctccaagctggcactgatttcaatgctttggtttgtgctcataaggaagctattgagaccatggaattttccgaagattccgatgaggatactgtctcttctgttcctatcaaaagactgacgccaagtgttagcaatatagataatctgaaaaacaaggtgtccaataatgaaaaaccatctagtacgcgtggaataaaagaaaagaagaagaagcctgaagagcgtaagaagaagcggtctgttcaagaggaggagagggagcgaggaagggttagcttacaggtttacttgtcatacatgggagaagcatacaaaggtacactgatacccctcattatcctggcccaaaccatgtttcaagtacttcagattgcgagtaactggtggatggcatgggcaaacccacaaacagaaggagatgcacctaagacagacagtgtggttctcttggttgtttatatgtcccttgcctttgggagttcattgtttgtgtttgtgagaagtcttcttgtggctacatttggtttagcaactgcacagaagctgtttgtaaagatgctaaggtgtgtttttcgagcgccaatgtcattctttgatactacaccatctggtcgaattttgaaccgagtaagttaaatttgttctttctcctgttaatattattttgtatcacttgattcttaaatgtgccatttctaatgtgaatcatgcataccaggtttctgtagatcaaagtgtcgtggaccttgatatagcattcagacttggtggatttgcatcaacaacaattcaactacttggaattgttgctgtcatgagcaaagtcacatggcaagttttgattcttatagttcctatggctgttgcatgcatgtggatgcaggtaattcattgctgaggcagtgaaaactgaatttcttgcttgtgtttaaagaattgagacgtttcacatttctcttcgtaaaaaacattttgcttgcttgcttttgcttactatcagtaatatatgttttctaatcaggggtttttttactgataaatattatctaccacgcagagatattatattgcttcatcaagggaattgactaggatcttaagcgtacagaagtcgccggtgatccatttgtttagtgagtcaattgctggtgctgctacaatcagaggttttggtcaagagaaacgattcatgaaaagaaatctttaccttcttgactgttttgctcggcctctattttccagcctggcagctattgaatggctgtgcctgcgaatggaattgctctcgacctttgtcttcgctttttgcatggcgatactagtgagcttccctcctggcacaattgaaccaagtatgtcttatctggtgtcacatgtactgttctattgcattttgtgatatttctttacctaatcatttacataagcacagaggaaagtcttgcatcattttgtcggtttacattttgctttatctaagtgtggttctatcttgataggtatggctgggcttgctgtcacttatggacttaatttaaatgctcgcatgtcaaggtggatactgagcttctgtaaattagagaatagaatcatctctgttgaacgcatttatcagtattgcaagcttcccagtgaagcaccactcatcattgagaatagccgtccctcatcctcgtggcctgagaatggaaacattgagctggtcgatctcaaggtacaatcctgaactgatgtgtattttatctctgtcctctcctaagccaatcccatttgtgaatttaattctattatcaaacatgacaggtacggtacaaagatgacctgcccttagttctacatggaatcagttgtatatttcccggtggaaaaaagattgggattgtggggcgaactggaagtggtaaatctactcttattcaggcccttttccgcttaattgaacctacaggagggaaagttatcatcgatgacgtcgatatttctagaattggcctgcatgatctgcggtcacggttgagcatcattccccaggaccctacgttgtttgagggtactatcagaatgaatcttgatcctcttgaagaatgtactgatcaggaaatttgggaggtacgccctggtcactttcaatgctgcagccatgttaaatatgtcttgatttttatggaaggacctcttttctttcaggcactagaaaagtgtcagctcggagaggtcattcggtccaaggatgaaaagctggacagtccaggtctgtttctttcttgaataaatggataattcttgtaaagtatggtgtttttcccctctaaatttattttcctgggcgtctgttgggttgcagtactggagaatggagataactggagtgtgggacaacgccagcttattgcattgggtagggccctgctgaaacaggcaaaaattttggtgcttgacgaggcaacagcatcagttgacacagctacggacaatcttattcaaaagattattcgcagtgaattcaaggattgcacggtctgcaccattgcacaccgtatcccgacggttattgatagtgacctagtcctggtgcttagtgatggtacggtctcttcactgaaattaaccaaatgacctaagaattttcctattcacctgtcaaaacttgtccattttacctttcttttgttgtgaacttatcttatcctttggattccaggtaaaattgcagagtttgacacaccccagaggctcttggaggacaagtcctccatgttcatgcagctagtatctgaatactcaactcggtcaagctgtatatagagaggcttagcttaaaatcccccacaccaagtaggaacagggaggtaggatagccacatctgccagtggactcacgccatagaagtaccaacatcatagggcaagacacaagccgaggtgtatatgagcggaaacaaaatgttccctgacgtgaataaaccatggaatcgatgagggaacgcagcgggcagcaccacgggaggagttggtgagattacccgaagctctgatgcttctgaatgtataaacaatgcggtactacttctcccttgcatagtggaaaaagggaaggcaatgttcatgggtaataaaggggtaacaagtttcattttggc</dnaseqindica> 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| External Link(s) |
