Difference between revisions of "Os06g0625400"

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==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]]
GeneName = Os06g0625400|
 
Description = Similar to Metalloendopeptidase|
 
Version = NM_001064647.1 GI:115469025 GeneID:4341569|
 
Length = 10260 bp|
 
Definition = Oryza sativa Japonica Group Os06g0625400, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
 
AP = Chromosome 6:26077334..26087593|
 
CDS = 26077923..26078005,26078202..26078352,26079096..26079197,26079377..26079457,26079555..26079675<br>,26079939..26080056,26080169..26080292,26080466..26080618,26080772..26080999<br>,26081110..26081247,26081622..26081771,26081895..26082065,26082198..26082401<br>,26082535..26082759,26083116..26083250,26083650..26083751,26084241..26084481<br>,26086331..26086344|
 
GCID = <gbrowseImage1>
 
name=NC_008399:26077334..26087593
 
source=RiceChromosome06
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008399:26077334..26087593
 
source=RiceChromosome06
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>accacatgttgcaatccatttggtgctatggcaagcctttttgcaccaaagctacctggtggcttggctgcaagcctaactggtgaaagatcacctgctgcggataaaataaagcctgtgaaaagggaaagacaggcaattaggccacctgtagaacataagtggtctcttcctggagttgcccaggatgccaagcctccagcaatttttcaacatgaattgatccagagtttctcaatcaacatgttctgtaagatacctgttaaccaagttcagacatataaagacctgcgaagtgtcctgatgaagcggatatttttatctgctctgcattttcgaatcaatacaagatataagagctcaaatcctccttttacatccgtcgagctggatcatagtgactctggaagggaaggttgcactgtcactactcttacagtaacagctgaaccccagaattggaggagtgccatcaaagttgccgttcatgaggttaggagactcaaagagtttggtgtcacaatgggggaaatgacccgctacatggatgcactgataaaagatagcgagcaactggctatgatgattgatagtgttccctcagttgacaacttggacttcattatggagagtgatgcacttcgccatactgttatggatcaattgcaggggcatgaaagtttgcttgctgttgctgaaaccgtcacccttgaggaggtcaacactgttggtgcagaagttctggaatttatttcagattatggaaagcctgatgcaccgcttcctgctgctattgtggcctgtgtacccaaaaaggtccacatggatggagtaggtgaaactgattttgagatacatccggaagaaataactgattccatcaaggcgggtcttgaggaacctatttacccagagcctgagctcgaggtgccaaaagaactgattactcggtctgagcttgaggacttgaaattgcaacgcaaaccatcatttgcttctctgagtaaagaggagaatgttgtgaaaatatttgacgatgaaactggtatagcacagcgccgcctttctaatggaatttccatcaattataagatcacacaaaatgaggcaagggttggtgttatgcgactgatagtaggtggtgggagggcaacagaagattctgaatctaagggatctgttattgttggtgttcgtactttgagtgaaggtggctgtgttggcaacttttcaagggaacaggttgaacttttctgtgtgaataatctcataaactgctcattagaatccaatgaggagttcatttttatggagttcagatttgctttaagagacaatggcatgcgcgctgctttccaactcctccatatggtccttgagcataatgtgtggctagaagatgcatttgatagagcaactcagctatacctgtcttactatcgctccattcccaaaagtttggagcgctctacagcccacaagcttatgttagccatgttgaaccatgatgaaaggtttgtagagccatcaccacattcattgcagaaattgactctccaatcagtcaaagatgctgttatgaaccagtttgttggtgacaacatggaggtcagtattgttggtgatttcactgaagaagaggtcgaatcttgtgttcttgactatcttgggactgtgagtgctccaaaatcttcaaaaacacaggagcatattgagaagatttccttcctgccgtttccttcggacttgcattttcagcaagtatacataaaggatactgatgagagagcttgtgcctacattgctggccctgcacctaatcgctgggggtttgcaactgaagggaatgatctattcaatgtcatccggagttctagtggagatgctcaagtttctgaatcagcaaacacagatcttacggagaggaaacataatgacgttcgcagccattctctgttctttggcatcactttgagtttgttggctgaaattattaattctaggctattcacaacagttcgagattccatgggattaacctacgatgtttcttttgaactaaacctttttgacaaattggaccttggttggtatgtgattgcagtaacatcaaccccgagcaaggttcataaagctgttgatgcatgcaaaggtgttctcagaggattacatagtaacaaaattgttgaaagggagctggaccgggcaaagaggacgttattgatgaaacatgaggctgagacaaagacaaatgcctattggcttggtttactagcccatctgcagtcttcatctgtgcctagaaaggaaatatcctgcatcaaggaattgacgatgttgtatgaaagtgccacgattgaggacttgtatcttgcatatgagcacctaaaagttgatgaatcttctttgtttgcttgcattgggattgctggtgctgaatctggcgaagagacgactgatgatgagctcgatatgggcctgcatggcatgggtcctattggaggccgtggtctatcaacaatgaccagaccaaccacatga</cdnaseq>|
 
AA = <aaseq>TTCCNPFGAMASLFAPKLPGGLAASLTGERSPAADKIKPVKRER                    QAIRPPVEHKWSLPGVAQDAKPPAIFQHELIQSFSINMFCKIPVNQVQTYKDLRSVLM                    KRIFLSALHFRINTRYKSSNPPFTSVELDHSDSGREGCTVTTLTVTAEPQNWRSAIKV                    AVHEVRRLKEFGVTMGEMTRYMDALIKDSEQLAMMIDSVPSVDNLDFIMESDALRHTV                    MDQLQGHESLLAVAETVTLEEVNTVGAEVLEFISDYGKPDAPLPAAIVACVPKKVHMD                    GVGETDFEIHPEEITDSIKAGLEEPIYPEPELEVPKELITRSELEDLKLQRKPSFASL                    SKEENVVKIFDDETGIAQRRLSNGISINYKITQNEARVGVMRLIVGGGRATEDSESKG                    SVIVGVRTLSEGGCVGNFSREQVELFCVNNLINCSLESNEEFIFMEFRFALRDNGMRA                    AFQLLHMVLEHNVWLEDAFDRATQLYLSYYRSIPKSLERSTAHKLMLAMLNHDERFVE                    PSPHSLQKLTLQSVKDAVMNQFVGDNMEVSIVGDFTEEEVESCVLDYLGTVSAPKSSK                    TQEHIEKISFLPFPSDLHFQQVYIKDTDERACAYIAGPAPNRWGFATEGNDLFNVIRS                    SSGDAQVSESANTDLTERKHNDVRSHSLFFGITLSLLAEIINSRLFTTVRDSMGLTYD                    VSFELNLFDKLDLGWYVIAVTSTPSKVHKAVDACKGVLRGLHSNKIVERELDRAKRTL                    LMKHEAETKTNAYWLGLLAHLQSSSVPRKEISCIKELTMLYESATIEDLYLAYEHLKV                    DESSLFACIGIAGAESGEETTDDELDMGLHGMGPIGGRGLSTMTRPTT</aaseq>|
 
DNA = <dnaseqindica>9589..9671#9242..9392#8397..8498#8137..8217#7919..8039#7538..7655#7302..7425#6976..7128#6595..6822#6347..6484#5823..5972#5529..5699#5193..5396#4835..5059#4344..4478#3843..3944#3113..3353#1250..1263#atctcttcttcctcccttcccctcgggccaagggccatctcacccccaccaccgcgatggcctccttcccctcccctccgctcgccgcggcggcggccgcagcgccgccccgcctcgccccgggcctccccctggccgccgccgccgtgcgcaggccctcctccctcgcgcgccggtcctccatcgccctcgccgccccggccaaccccctccgctgcatccaccgccgcgccgtgtcgcccaggtgagcccgaagaggagtttggttacctctgtcccgcccccgcccccactcgtctagggttccagcggaattggccgcccgcgagactctgattttcagcgtggattgttgtgtgttgccctgcaggttgaggaggcggacggaagctgtcggcgcggcctcggcggcgattgggagcctcggcgaggagagggaagggtgcctctcgtgcttccccaggggccggaggcgggggaggccggggctcgcgaggttcgcgccgtgcgcgctcccgcacacctatgggctatcgtcgctccacagcgggttgactggcgctaaggttcgtgtcatccgtaatgcgtctgaattgatagattaggaaaatccggttcagttaattggggatcattggatgagtgttgtggacaaaagtggccagttcccttgcttgcgatgctgtgtcctcctcggttgctttttaatggtgcgtgtggtttattgggaataggatcggtacaacaaatgtggatatcgctatcagtaaagcattgagtgcgcctgtatgtatttctccgacttatacagaaatcttaaacatgggataggtccgcatgttttaatttacagcacaaatggcaagctaattgttgaattaacatcaaagttgaagctagaaagaagtactgtactgcaaatcatcgcttaaagcaccattcttcagggctggttctcaacggcatgtgaacagtgaacacactcgagaattaggaacacgtcttttcatatgtttgttttgatgcatttacttgtatttattcaaagaatccagcttcaattatgttataaaacaggaaataataaattaataaaggttatatggcactacagagtataacatgatcccatagttccccttcttgattaaagtggttcaatggaataaaattcatgaattctgaccacgatgtttgatgattttcagatcaggcgtcgccatgtattacatgctgctggacctgatgaaccacatgttgcaagtccaacttggtctgaaactgctctggataaacattatgtagatcagccaattgggaaggaggaacttgaaggttttcttaacacaccgcttccttctcatccaaagctagtccgaggacaattgaagaatggcctccgatatcttattctaccaaacaaagttccagcaaacaggtgaagaaacttgtttcatttccacctataaacccttcttttgcagcagtaccaacataaccttcagctgctataacaaaagtatttacatgatttgggatgccgtgagttgtatttcctagcagtgtgggggcctacagttttgacttttgacaagttgttatgttaatttcgttgcaacataactatttggattttggaccctttaaacattcaatatactttagtgttgattcctggacatcaaaattgtttcagtatattgatatattgacaaatattatacggtggcttggggcctagttcatgccagtaaattacactacaaacttgtgctaaatgtagagcatatacacaatgttctaatatgcttgtcaaccggtgattaggtgcaatgctgatgcaagattctaactaatcttttttgcaggtttgaggctcacatggaagttcatgttggatcaattgatgaggaagaagatgagcagggaattgcacatatgattgagcatgttgcatttcttggcagtaaaaagcgtgaaaaacttttggggacaggtgcaaggtctaatgcatatacagatttccaccataccgtgttccatatacattctccaactaaaacaaaggtatgtacttttgcagtcatcggttgtttctttaagtctatctctgttttctattgctttgaatattttctttgacaagaatatatatgaaaatcaactgggaaactgttgactgccatattatgtgcataacatgtcttcaacgcttaacatatgtaggtatttcaatctggtggtccaaatttgatgtcttctcttgtttatttaagggtttaacatattagcttgtcttttatgtggcaggaatatggtgaagacttgctcccttctgtgttggatgcattgaatgaggtgggatgttacgtataggctatatgcgcagcttttgctaccattttatttctttttggttaagggcctttcaaataacaattatctttcatttggcgataaaagttttacatgcatttgggtagcctgtttaacaaattctctttctgccaaatttttgttctcccagatagcttttcatccaaaattttcttcttctcgtgttgagaaagagagaagagcaattctttcagagctccagatgatgaacacaatcgagtatcgtgttgattgtcaggcaagtaattattttactctgtaccactttttagggcatcctctgagaagggattgttcctcttgggacacatgctaaatcaattcatatttaagggtactatctttctatactaattgcaattcatttggtgtagttattgcaacatttgcactcagaaaacaaactgagcgaaagattccctattggacttgaagagcagatacataaatgggatcctgataagatccgcagatttcatgagcgttggtattaccctgctaatgctactttatatctggtaggagagatcgatgatattcccagagcaatacgagaaatagaggtaactagaattacaacctcctaactgttgttttttcttatatttctgctgatctgttttttggattaatcgtaaactgactcatatgcaatgcaggctgtgtttgaacatacacttccagaaggtgaagcagcccctatgtcaactgcaagtccatttggtgctatggcaagcctttttgcaccaaagctacctggtggcttggctgcaagcctaactggtgaaagatcacctgctgcggataaaataaagcctgtgaaaagggaaagacaggcaattaggccacctgtagaacataagtggtctcttcctggagttgcccaggatgccaagcctccagcaatttttcaacatgaattgatccagagtttctcaatcaacatgttctgtaaggtatgattgtttgctatctgctgaattttactctttagggcttgttctgttaatcctcatgaggaaggggttgagagggattaattccacacctcaatagatgtggaataaatccccctcaatccctttgggggagggattaactgaacaatgcatttgggttgcgctttgtgcctctacagcttagtgttagcttagtttaacaccagatgtttccatagtggtttctgttataatatatagtagatgggaaccagtattttgttgtaatcagcgaaaagtttgatagccctttcttccctccctctctgtgcacatgcacacatattccgcctgtgcctaactattcattttctcttctcagatatgattctattttatgattcaaatgagaacagtctttagctttaagcttactcttctctttgaactttcttaaaaatgcatcatttgtatatgcctaactaattgatttctttttgtggacagatacctgttaaccaagttcagacatataaagacctgcgaagtgtcctgatgaagcggatatttttatctgctctgcattttcgaatcaatacaagatataaggttcgtgatatttaatcaacgtgaattttgaatcactctaattttttcacttatgctgagactttctttggtttatctctctaaagaatgcagataagttcatatgatttgcattcttttatatctatatctagcacatgtttttttctttttgtagattgtttgtacatgtttaacagatagacataagacatgcattttactggacattagacttgctgcataagtctgtaggaggcctgaggtctttccagtgaagtatttacatttgtttggaatcatctcttttttttttgcttggaattaggtttaagtaattaatagttccatgtttcttgtttctagtttttagtgataaaaacatctttcctgtatatgaatgctgtattttttatacagagctcaaatcctccttttacatccgtcgagctggatcatagtgactctggaagggaaggttgcactgtcactactcttacagtaacagctgaaccccagaattggaggagtgccatcaaagttgccgttcatgaggtttgtatagtatactcatgaccagtttatctgttttacatgacttgttctagctcacactcaatttaatcaatggaattatatatagacagtcatagataatttcaggaaatgtaattgttggaaggaacaaatagaaaaaagaaacagttcaatggaagttattgaagcaagattttattagcacaagacccgcataaagcaaaacttgcctatgtcctgtgtaacgctgctagccaaagcctaatctgacctgatcttcatccaacctggtcccaacacaacccaagcattctttaaagggaagctcaagcgttcccttacttttactaacttatctttacctgctgtttcaggttaggagactcaaagagtttggtgtcacaatgggggaaatgacccgctacatggatgcactgataaaagatagcgagcaactggctatgatgattgatagtgttccctcagttgacaacttggacttcattatggagagtgatgcacttcgccatactgttatggatcaattgcaggggcatgaaagtttgcttgctgttgctgaaaccgtcacccttgaggaggtatggcgattttcttttatacaagtcacagaggaaaaaaataaatatatggcatggcatcagttcattttgccttgtttttagttctactacttcatattatacataatgaattatgttttaccatatgtaggtcaacactgttggtgcagaagttctggaatttatttcagattatggaaagcctgatgcaccgcttcctgctgctattgtggcctgtgtacccaaaaaggtccacatggatggagtaggtgaaactgattttgagatacatccggaagaaataactgattccatcaaggcgggtcttgaggaacctatttacccagagcctgaggtacgttggttacttatggtatctcttgcttgttgtgagctatctacctggtgtagagcagtatgtttgggatcttgtttggttctggtgtcttgattggttgctaaatgattattgttattgtggctacagctcgaggtgccaaaagaactgattactcggtctgagcttgaggacttgaaattgcaacgcaaaccatcatttgcttctctgagtaaagaggagaatgttgtgaaaatatttgacgatgaaactggtatagcacagcgccgcctttctaatggaatttccatcaattataaggtaatactaataaattggaaacctctggctattgttatcaggattgaacagtgtcttgttccagttttgttgtagttcactttgttattccattgtaaaaattgtgtggtaaattgatgacagatcacacaaaatgaggcaagggttggtgttatgcgactgatagtaggtggtgggagggcaacagaagattctgaatctaagggatctgttattgttggtgttcgtactttgagtgaaggtggctgtgttggcaacttttcaagggaacaggtatctccaacatacggatttgtctactagcaaactgttacagtttgtctgttgattttacctccatctacctcacccacttcaatacatgtgctaatcagactcttctaactttgagcccctatatatttatgaaaaatacttggactagccacaagaatatttaccctctgtgtcatcacgttcataaataaaacatagttctatattgtccattcaatattttaaatcattcattcccatgcatatcctctaacaacaatagttgcatggagtcaaatgtatttttctcacagattgtttacctttgaacaagctgtactgctaattattcaaactctaaagcacttcataaagtctttatatgatttcaggttgaacttttctgtgtgaataatctcataaactgctcattagaatccaatgaggagttcatttttatggagttcagatttgctttaagagacaatggcatgcgcgctgctttccaactcctccatatggtccttgaggtaggttttcaattaactacattgtatactcatctgtgttgttataggagaactccgttttccctaatgcaaatatctcatgcttacaaatttttgtctccattttacagcataatgtgtggctagaagatgcatttgatagagcaactcagctatacctgtcttactatcgctccattcccaaaagtttggagcgctctacagcccacaagcttatgttagccatgttgaaccatgatgaaaggtttgtagagccatcaccacattcattgcagaaattgactctccaatcagtcaaagatgctgttatgaaccagtttgttggtgacaacatggaggttagtgtagtaattcatcgttttcgagtttctttctcttttttccccttcaagtgtgttctcattgcgcctgtatgattggtctaacatatcaacatattcctattgtttttgtctgtttttatttaatattatctacaataaattttccaggtcagtattgttggtgatttcactgaagaagaggtcgaatcttgtgttcttgactatcttgggactgtgagtgctccaaaatcttcaaaaacacaggagcatattgagaagatttccttcctgccgtttccttcggacttgcattttcagcaagtatgaagttctctgtagccctcataagcagatacttttttcttcattatgttaatgatttaataacatatagttacatgtcattatgaaactagtgttataaaagggagaaagatagatgcacgcgagcatgtttgtatttgtttgtttgatcattggctcttctttaccaggtatacataaaggatactgatgagagagcttgtgcctacattgctggccctgcacctaatcgctgggggtttgcaactgaagggaatgatctattcaatgtcatccggagttctagtggagatggtaattctaaaaaaagacatgcactgcactgtgaattacctcatttagcaccatatatcctacaagttagacctgacacgagcatacaagctaatactgccatactttgcagctcaagtttctgaatcagcaaacacagatcttacggagaggaaacataatgacgttcgcagccattctctgttctttggcatcactttgagtttgttggctgaaattattaattctaggtaaaatatttccacacatctatttgttttattagaacattattagcttatcatgtttacagaatgcatgtcatggtaacctttgaataatctagtgattagtgctagtaactcatgcggtgtttctccccttgatgtttcactatacatgtgtcattgttcttaaccgtaaaaacgtagtgttgtgatatcattgtcttggagagactgctatattgcattttgctaaaaagattaacatgacacgatggctgttttctcaggctattcacaacagttcgagattccatgggattaacctacgatgtttcttttgaactaaacctttttgacaaattggaccttggttggtatgtgattgcagtaacatcaaccccgagcaaggtattttccctttgagcttgaacttgctgtgctatgtgccttgtcttctttggtctcaacttttctctttcttacatttggtcaattctgactccaggttcataaagctgttgatgcatgcaaaggtgttctcagaggattacatagtaacaaaattgttgaaagggagctggaccgggttagtcaactttctagacttgatagttttaacaagtgaacctacacattttgcttgattttttcatatacagctaagtacagcctcagtacgagaagattgagcagcaaacaacacagttttctacatgctaattggttttatttcttattgctgatggcaattttcatgtgcttcaggcaaagaggacgttattgatgaaacatgaggctgagacaaagacaaatgcctattggcttggtttactagcccatctgcagtcttcatctgtgcctagaaaggtgaagcataaattgtttgtgtgtgcgctccaccaaaaagaaaaaagaaacagaatcagaaataagcttactctacattatagctctaactgcattggtacttcattcaccttgacatactaatagtaatactgtggagaacaagggtttgcatatgtggccttcacctaagtgcacttgtaagcatacttcaccaccaattcatggagttaaggataactaacaacagaatgttttattgggtgaaaataactattcccttcggccataaatacttacgtttaggacaagatttggtcaaacttttgaaacattgactgttaatagcttctcaaatcgcttagttaaaaaaacaagaaaaatggggtgcatagatctggcttgaaaagcaccatcataatagcataaatttattcgaatacaaaattgatagtcaaacttttaaaactttttttaaaagttatataagttcgatgaatcttgtccgagacgtcgaatgtttatgaccatagggagtaataagtatggaaacgtgtaatcccatcatcttttattgaccgtggtttgtaaaaagaagtcttgaacagctgtgaacgtagtgtgtatccgttattgtatgatttcttctctaaattttgtggatttcttcccatttatttggttacttcaggctaaaaaatcttatttcttgttggtattatatcactgtcttactgtatttcgtccctatcaaatcaatgcaggaaatatcctgcatcaaggaattgacgatgttgtatgaaagtgccacgattgaggacttgtatcttgcatatgagcacctaaaagttgatgaatcttctttgtttgcttgcattgggattgctggtgctgaatctggcgaagagacgactggtatgtggtttgaactttgcactaagtatccttagttatatggtttgctactttgcgtcagttagacagttaggatgaaaccttttaacttgggctaatctagtagaagctagttgcagtctagtgtaatttattgtggttttatccgttatttgctgttgttattttatatgttaacgatgcaattgaactgcagatgatgagctcgatatgggcctgcatggcatgggtcctattggaggccgtggtctatcaacaatgaccagaccaaccacatgatttctgcaacttccgatgactgaacttttgtaaaggtgtgcttattttgaggtggtggtgggtgttctgcgttgcaatccctctgttgggtttctaacatgaacaatctccgttgcgtgcatttgcagggatcgagctagctcctcaagctaggagttgtatgatcctgttcgagacaaatgttgacagttgtgcgttggcacatactgttttagactcctcgtgcgttgagatcggatcaaatcgctatttcttgtgcattgcaaccgaaggcttggctgccacaattctttttgtgatattgcgttgattgatggcgaggtcctgaaaggtcaggcagcttcacatgtatagtaaagaactaaaaaggttcatcgttgttgtaactaggatacatcaggtcattgaaaaggtaggggccagtagaatctcagataaattgctgtgcgacggctatagcgtaggggtcttataacgcaataatgcaagcccacaagttgtaacattctagtattatttttctcgaaaatgtatatttgagctatttatatttattaggtttcacaattttgtgatgattctactatcc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064647.1 RefSeq:Os06g0625400]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 6]]
 
[[Category:Chromosome 6]]
 

Revision as of 09:01, 14 May 2015

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