Difference between revisions of "Os07g0184900"

From RiceWiki
Jump to: navigation, search
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 7]]
GeneName = Os07g0184900|
 
Description = Similar to Ku70-like protein|
 
Version = NM_001065596.1 GI:115470924 GeneID:4342584|
 
Length = 10993 bp|
 
Definition = Oryza sativa Japonica Group Os07g0184900, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
 
AP = Chromosome 7:4517409..4528401|
 
CDS = 4517467..4517529,4517627..4517701,4517914..4518030,4518533..4518647,4519328..4519433<br>,4519684..4519801,4519905..4519988,4520059..4520117,4520697..4520830<br>,4520932..4520975,4521100..4521176,4521415..4521562,4522155..4522216<br>,4525701..4525761,4526212..4526304,4526372..4526489,4527003..4527105<br>,4527342..4527525,4527974..4528087|
 
GCID = <gbrowseImage1>
 
name=NC_008400:4517409..4528401
 
source=RiceChromosome07
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008400:4517409..4528401
 
source=RiceChromosome07
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggatctggaccccgagggcctcttccgcgacgacagcgacgaggatgacgacaacgtccaggagagggaggccaacaaggagatggtcgtctacctcatcgacgcctcgcccaagatgttcacccctgcgaccaaggcagatgaaaaggaggagacacattttcatacgatagtgaactgcatcacacatgcgctgaagacgcagattatcggtagatcctatgatgaagtcgctatatgtttctttaacacgaaagaaaagaagaatttacaggaattggctggtgtttatgtttataatgttacagagagagaaccacttgataggcctgatgcaagattgattaaggaattttcttgtatagaagattcttttatgagtaatattggaagtcggtacggaataacttctggatctcgagagaataccttgtacaatgctctttgggttgcacaggcattgctgcgtaaaggatctgtgaagactgtgagtaagcggattgttatattcaccaacgaagatgatccttttggtggtcttacaggagcagtaaagactgatatgataaggacaacaatccaacgtgcaagagatgcacaagatcttggcctgtccattgaacttcttcctttgagtaggcccgatgaggagttcaacatgtccctgttttatgcagatttaattggtctggagggagatgaaatagtggattatctgccatcttctggtgaaaagctggaggatatgactaatcagctgaaaaaacgaatgatgaagaaacgcaaagtcaaaactcttgcatttgcaattaccaatgatgtttgcatagaggtgaatacatatgcgctaatccgttcaactactccaggggcaattacatggcttgattctatcagcaacctgccattgaaggctgaaaggtctttcatatgcaatgacactggggcccttattcaggatccacaaaagcgcttccaggtgtacaatgacaaaattgttaaattctctactcgtgaattgtctgatgtgaagagggtttcaagtcatcatctacgccttttaggattcaagccactggactaccttaaagattatcacaacttaagaccgtcaacatttatttaccccagtgatgagcaaatatttggaagcactcgtgttttcgttgctttacatagctcaatgcggcgtcttggaaggtttgcacttgcattttacgggaatccaactcgcccacaacttgtagcccttattgcacaagaagaggttacttctgctggtggtcaaattgaaccacctggaatacacatgatctatcttccatactcggatgatgttagatatcctgaggaggttcatctgacttctgatgatgcacctcgtgccacagatgaacaaattaagaaagcttcaaatctattgagacgtattgatttgaagaacttctcagtatgccaattttctaacccagcattgcaaagacactatgggatcttggaggccttagctttaggtgaagatgagatgccagatgtcaaggatgaaacccttcctgatgaagagggcttggctaggccagtagtagttaaagctgtcgaggaatttaaggcttcagtctatggtgaaaattatgatcaagaggaagccgaggcagcagcagcgaaggctggggcttcaaagaagaggaaagcacttactgatgcagctgcagagaaaagtgcagcacataattgggcagaacttgcggatactggaaagctgaaggacatgacggtggtggacttgaaatcttacctgagtgcacatggcctcccagtttctggaaagaaagaggcactcgtcagcagaatcttgactcatctaggcaagtga</cdnaseq>|
 
AA = <aaseq>MDLDPEGLFRDDSDEDDDNVQEREANKEMVVYLIDASPKMFTPA                    TKADEKEETHFHTIVNCITHALKTQIIGRSYDEVAICFFNTKEKKNLQELAGVYVYNV                    TEREPLDRPDARLIKEFSCIEDSFMSNIGSRYGITSGSRENTLYNALWVAQALLRKGS                    VKTVSKRIVIFTNEDDPFGGLTGAVKTDMIRTTIQRARDAQDLGLSIELLPLSRPDEE                    FNMSLFYADLIGLEGDEIVDYLPSSGEKLEDMTNQLKKRMMKKRKVKTLAFAITNDVC                    IEVNTYALIRSTTPGAITWLDSISNLPLKAERSFICNDTGALIQDPQKRFQVYNDKIV                    KFSTRELSDVKRVSSHHLRLLGFKPLDYLKDYHNLRPSTFIYPSDEQIFGSTRVFVAL                    HSSMRRLGRFALAFYGNPTRPQLVALIAQEEVTSAGGQIEPPGIHMIYLPYSDDVRYP                    EEVHLTSDDAPRATDEQIKKASNLLRRIDLKNFSVCQFSNPALQRHYGILEALALGED                    EMPDVKDETLPDEEGLARPVVVKAVEEFKASVYGENYDQEEAEAAAAKAGASKKRKAL                    TDAAAEKSAAHNWAELADTGKLKDMTVVDLKSYLSAHGLPVSGKKEALVSRILTHLGK                    </aaseq>|
 
DNA = <dnaseqindica>59..121#219..293#506..622#1125..1239#1920..2025#2276..2393#2497..2580#2651..2709#3289..3422#3524..3567#3692..3768#4007..4154#4747..4808#8293..8353#8804..8896#8964..9081#9595..9697#9934..10117#10566..10679#ctagttggcttccagaagcttctagaaggtgcccgaggcgtcgtctcggtcgagcgccatggatctggaccccgagggcctcttccgcgacgacagcgacgaggatgacgacaacgtccaggtcgcgttccaccctgttcgagcttccctatcccccattttttctgtggctcgaatcctgtgaattgatgagcggtttggtttcttggagggaacaggagagggaggccaacaaggagatggtcgtctacctcatcgacgcctcgcccaagatgttcacccctgcgaccaaggtgaaattccagcagcttcagcgcctaatttgataaatctctctgccctgtgcgagctcaagtgttgcaattagcgatggatattgggaatgggatgatacatttaccgattattttatctgtgatgtttggtctggattggattgtctatgttcaatcaagttcttttgctaggtagtagttaagcatgttttttctgccatttattgcaggcagatgaaaaggaggagacacattttcatacgatagtgaactgcatcacacatgcgctgaagacgcagattatcggtagatcctatgatgaagtcgctatatgtttctttaacacggtaagactaattaaagaactatgtgtcatcttatatattgctatgactctgcttctattagtcagctagttaatttctttgctgtttaaatctatgatttctacaagtatttaacatccacagtgttgtaagtctacaccacactgttgcttgttagttttaattaattatattttctaagcttgacagatgaacatacttaaaatgtgaaaaaagaatcagaattgccaagtggtaaaaggaagaaaaaaaaagacaagttgctatattttggtaacagtaactcttaattggttgaaaagctgatctgaattttgttactttgcaccatggagattataaatataaatatatgattctcagataattggtaaaataatctatgatattcttatcccactcactatccttagatcattaacaatgtaggatctgtatatcgttatccttatgtcattacaagatatgcttgtttgatctggtttttacataactattgcagaaagaaaagaagaatttacaggaattggctggtgtttatgtttataatgttacagagagagaaccacttgataggcctgatgcaagattgattaaggaattttcttgtatagaaggtaatgtaattacataaattgttcttttctcaatacatgaatgtggtgatgtggtcaaggtttgtgggatatgcatgctttacttctttcatgtactaggtatggttcatagatcatcattgaattgtccaactgaacgcttgcctttcattacttgtatggaatattataggattgacatgtttgttttcttttagcaaaatattctgagaaattgtgaaatttgtgattatgcaatctttcctatcatctatctgtagaatttgtttgggttttcattttcttttgccacatcatcaccattcctattccacctgcattttctagcttacaatttgtgctgccttatatgttctatcttcttctcaaaacttatttaacagactataatgcctagtgttttagaaagtcgaacacatgatctgttatctgtgtcttgagttgcttctctgttcccattaggaacttaaggtttgataatatcatatttcttctgtaaaattgactccaagatctcattagaagcagtacatcactatttcgtattgatgttttatattatatttattttgtctgaaagtccaggtagattgaattggactgctatacttattgtgtagcaaaattgagcatccttttttgcatgacatgattctaaagcttattttgatttatggtagattcttttatgagtaatattggaagtcggtacggaataacttctggatctcgagagaataccttgtacaatgctctttgggttgcacaggcattgctgcgtaaagggtaacacaccactttccctccttcagctctaaaaagcagcatagctttaataacaaattctattagagctttaacatattctctatatacctcaacctgtttttcaggtgcactcaacaaatttaaaattttcgcatattgcgcaaaaatgatgcattttgcaccatttgcattatactgaatgttgatgaggatatttaaatactttaagtgaatgaacattctgctggtggttttataaattcttcagatctgtgaagactgtgagtaagcggattgttatattcaccaacgaagatgatccttttggtggtcttacaggagcagtaaagactgatatgataaggacaacaatccaacgtgcaagagtatgcctatgacagatatatgttcaatttcgtgctgaatcacaacaacataccatgttcttagtggcctttgtatcattaattgtctattgtcttcctacaggatgcacaagatcttggcctgtccattgaacttcttcctttgagtaggcccgatgaggagttcaacatgtccctgttttatgcagtaaatctcttttatcacatattgcgcaacccttttaagttccaacggctaaacaacacctatttcccaggatttaattggtctggagggagatgaaatagtggattatctgccatcttctggtgaaaagtattgctccctaagcatcgatttcacttgttgattgttttctgattagtgattagttgatagttgcagatttactatataccatcttttgcttgcattaccaaagtacggaacaaaagatccatcattgagtggagataacctgtgctacagaattagacgtagcaatgctgtcctctatttttctgtagtaggtggcagttctgcttggagttccctgtagtatattgttaaaatcttcaaagttgaatagcttcctgtctgtgttccagccttttgggcatcgtgtatgggatttaggtgaagtagcctctgggtgtttctcatatgaactaatgttgcactaaacttgaacctctgtatggttgctaattaatagtaatgaccgacttacactatattaagaaacctcagtaatgtctactcttggccatcaatgtcttagtcttagtcatctattaatatgcacaagctactctgttggtccctagtaattttagaattctattgtttgaacggcacagattagcttagacctagttattctcattgtcttatccagtattgtcttctttgaaggctggaggatatgactaatcagctgaaaaaacgaatgatgaagaaacgcaaagtcaaaactcttgcatttgcaattaccaatgatgtttgcatagaggtgaatacatatgcgctaatccgttcaactactccaggtatgctctaacaactggcgatatttacttctttatctctttgcataatgttgctgtgagaatgtatgtataggcttgttactgtgacatcctttttgtaggggcaattacatggcttgattctatcagcaacctgccattgaaggtgattcatgcttcatgacaaagagatcaattttgtgttactttttttttttggggggggggggagattcggagttataaaatatcaagttttatgcggtactttaacaagaatgtatgtgtaggctgaaaggtctttcatatgcaatgacactggggcccttattcaggatccacaaaagcgcttccaggtgtacaatgagtaagtacacacatgagactggtgaaccaaagcggtgttatttttgtataattttctgggttgggttctgtgatctgcttcttgattgcttcatcaagcgcagaagtctacagttatgagtcatggcacgatcattgtctcgtcattccgtcatgttgttccttttccgtttcagtttgatgcttatatttgtaatccaaaactactttatcatatattcatgcacttttttgcacagcaaaattgttaaattctctactcgtgaattgtctgatgtgaagagggtttcaagtcatcatctacgccttttaggattcaagccactggactaccttaaagattatcacaacttaagaccgtcaacatttatttaccccagtgatgaggtaataacattacttcatgtacttcttaacttcaatcttgaggccctcttggcacagctccggatccaagatttcttggagctgggtattccgagctccacaaatccatggatctggatctgtgattacgttgataaacatttggataaatcatcttgttcccatttaaaattttaaatcactataatttaatacacaaacttcaaatctaccgtttgagttacagtttgaagttatactagtacaattatctccttcatcttaattttttttgtcaaacacgcaggagagctgcgtagtcttgacaatattttgttatcttgttcgtttgttccctagattattgtacttctctagcttgaagcaataatataatagttgaaaaccttaatcattttatttgatgatattatttttcataataaaagatctatttgtgttcgatacacatccctgctgcatgctacttccaaactaaactaaatctgtctgaacatatttaggattgtattgtggtgtatgcttatttctttctcagtctttacttaaatctagggtgcatgttaggtttacctccttttgtttgatgcagcaaatatttggaagcactcgtgttttcgttgctttacatagctcaatgcggcgtcttggaaggttaagtcgacttattatatttctgccataatttctttaattttgaaagggtttagaaactgacatagttataaatggacataatgtatgtcaagtcataaaatgtactgtggattaaattaattaacattactgctcattttttgggataattagtgaggggatgcaattgaaaggggatgttagttttgttgaaatatcactctatgcgatagttatctcaaattacagctcactagtaatatgcccgtgctaaatgctacggtccaattttatttgtctttaataattttcaaaacgtcatgttagccaaaaaataaaaataaattatatgatctgagctttacgtacatcaaacaattttcacacataacacatcagtctcctttagatgtagataactcaaaataaacacataacacattagtttcctttaaaaagaataggcaatcgaagaaccatataatatagatagaattccttgatatgccaaaggacaaaatagctgaaaaaatatatgttggctagcttatgaaatgccacaaaaacagaaatctaactttagaatcaattaaataaagtttgcatatagtttgagccagaaacatcaaatagtaatactcccgcaaatcctaagatatcatttgaaaaggatgtgctcgagtgaatagtgatacaggccgccctccgaaccttctaaatgaactcaacaaagcaaaattacttagtggtttcatatttaaccatacaaatagttaagccaaggcactgtcatgttctaatattcagattagcattcaagtgtccatataagccctaacaatttattccacttatacttaaatccaacccattcaactcacgttatacattggaaggaggaactacatagagtagagctctcagcgttggtgggagattacacaggaaaagataaagctaccaacaaaattcagcaaccttaggggattactgaaatgtgtcactctcgccatcctccggcatccaaaatctgctctgaaatcctctgaattagcttctaatagtgatctcctcatggaaaacccaccttttagaagcagaaaagagctatcaaagtgaaaagagtagtagttattatttctgtcaagtacagataaccaagaacatatttgttaaaattgtaagttttatccatcgagacagaacagaaacataaataactgaaaagttggactcttgtgcatctgtaagatttgagtgaataaacactaaggatggaccatagcagcaacttgcaaagcacaggcttttttagctagtttatgcaaaggtactcaagtgtccatagaagccctaatgatgcattccacttatacttaaaatggaaaatgtcaactaaaccaaaaccatcgccaattaatgtagtccattaattatccatgctaatccagttcttccataattatgcctactaacataagatgccataagtaattacaggaggcctcccatctggatgacagaagagatagattgcttttagcaagaaaactgaataatattttttaacacaaaaaatcgcaagatacaataaaccagtccaatcacttaacccaaatgagaaaactgtatgccagatggataccttgttggtctggccacaatatagaacactcaagaaatctagaacgctaaagatgtgctcaatgaaatgcgtctgtgctgccaacttcacggtcgcaccagagctgctcccctacatgaaaaaaagaacacaaaataaaaaaagaatcagaaaaaaggaggccacaatttccttcagcggatgccagcttagaacgaaagaggttccacactttgtatccaaccttagtttcactcttgttacgtgcatacacaaacaacattgccttgcacactgcaatatagaaataatagatgaagttctagaaatagatggatttcgttactgcttaaggcctcaacggacttggattcgccggggaccacgctccttgcccgcacttcttcagatcttgttgcagagaagactacctcctgacctcttccaccactctctccgcatcctgcatgaagcagagtatcatgtatgatggacaagatgataatggtgaataatatggttcttatatgcttaccatgtaagattaaatggagatgatgcgggagagagaggacactgggagcaacgtggtcacggtggattgcgaccggcgcccggcggggcgtggacgcggccgaggagagcttaccttgttgcctagatcgtgtcaccgctgtacgcctcccattcggcctccgcatccttgcctcgccgcttactaccgcccgcctgaccgaagaaaatccctcctacatctgccgttgtcgcgtccttggtcctataaccggccaccgcctctgctggcgcaagggcaacgacggcgctagtgttgagggggcgccggtgtgtggaagggctcgagggcgaggtggcacaccgaatccccaggaggcagatatattagcggcagctccagtcagccacggcctagatcagcgatgcgagcggtggtgacggcgacgtgatttgcgaagttcggcgtgatttttgcgcagggagggagggagggagcgcggtggggatgtagagagcggatctgggagatggagagagggtggcggagagccggagaggggttgtgctgggttctggcggcggagcgaatcgtcggcggggagggctgtgcgacggcgattttgcggagggaggcgcgggatgggggtgcgacgtgcgagggcgaggccgtgagggcggcggctggcgatttggcggagggcgaagggcggtgtgcgaaagaaaagggaaaggaaaccgagcggtgatcccgtgcgtgcgattttccgctggtgaccccgcctgctaagttgttgattctgatgcgtcagatctcagcgagataatctggaccgttccatgatgaatgaaagaatgaaagaatgagtaaaagtatttgttgaactatagggtagataatgtacaaagcggcacagagttgtttgaattgttaaatgacaatagaaaatgttttgggattttttgccaatcttgtcattgcaattcactgagtttttaagaaaatgagaaaaaggaagaaaacaggtgttattttatgatttgtaaagctatactgttgttgacatcagggaatatatttctttaagtcataggctcaaatggtttgtttatttggcacctttttctgaactgtaagtttccagtgatgtcacttaggctttccgtcctaatgcaagtcatgtatttgtgacactaagtgactgggaatatgtattccgtcctaatgcaagtcatgcataggcaaaggtcctctgtagcctagtacatgcttatactaaccatgcatatgatatttcatgtggtcattttatatggttacatggtgcatttgaaaacttacaattatgaattgtaccatttcaggtttgcacttgcattttacgggaatccaactcgcccacaacttgtagcccttattgcacaagtgagggattctctccatgtctatattttgctttacgacatttgctgcattcagaattctagtttacaagtacaatatcagtgacctagttaaaacatatatatcaattgttaactaatgggttaatcctactgtgacgttgcaaaagaaagttcttatgctatttggaacttttcgagattgattgtggtacaaacacctgttggctacaaaaaaagaactagactgagccttgcttctttccacatattcccagcagccacctatatattaacatgggtgggaattgggaaaactggtaaagtgttttgtgaaatgcataacatagagacgcacatgcggccacatattttcgttttgtattctgtctgaattttgtttgtcagggattcttattacatagctatatcttatatactttttgaaattgactctggagaaaaataacaggaagaggttacttctgctggtggtcaaattgaaccacctggaatacacatgatctatcttccatactcggatgatgttagatatcctgaggaggtaatgattggcaccgcatccatatttcatcttttcagtaagctaataatttcaccttggcgtgcaggttcatctgacttctgatgatgcacctcgtgccacagatgaacaaattaagaaagcttcaaatctattgagacgtattgatttgaagaacttctcagtatgccaattttctaacccaggtaatcactgcatttatttgaacctcttattcacatcattaccgacagtactacattgagggtctgtttggttgttgcctaacattgccataactcagtttgccataggtgtggcatggcaaacaaagtgtggccaacaatttgttggccacaagtgtggcaatgtttggctagaaaatgagtatatgacatgtaggcccatgaaataagaaagtgtggcttgccacaactgaaacaagcaaccaaacgctaagctaacaatctgtggcatgcctaacatgtggtgtggcaatgtgtggcaccaaaccaaacagcccctgagttcatgtatttgtgaacctatccttcatacataaattctgataccatctgtgagcaattgctgctataatccgtagagctcattgggtcctgtcaataggcattaaagaagtattatgaacactccaatatgcagtacgactgaactattctgatcattgttcatgttttctattttccaccatgaaacagcattgcaaagacactatgggatcttggaggccttagctttaggtgaagatgagatgccagatgtcaaggatgaaacccttcctgatgaagagggcttggctaggtacttgtttttatttgtctattggagtctgctgaaatctccaaacccttatctgttcctctcgaatggaaattattgaataactatagagtcaagcatgttcatgttatttcagacactgaagatgaaagtgcagtctactacatattcaattcagttttacttttttgcataacaacaacgtacaacagtcacctcttgcttatgtgggttgtttcctaccactcttatctcaggccagtagtagttaaagctgtcgaggaatttaaggcttcagtctatggtgaaaattatgatcaagaggaagccgaggcagcagcagcgaaggctggggcttcaaagaagaggaaagcacttactgatgcagctgcagagaaaagtgcagcacataattgggcagaacttgcggatactggaaaggtaagcatgcaggtgctcttaccgatgggacaacaaagtgttctctaggcactgaattttactatgaaatatcttcttaatgctccaattaatctgataagaaattgtcttccagtagtttacccctctatggttctatccaccagtaattcaaaatgctagcttgcagtttgatatgccaatgtattacggaccttgcttatgtatgcaccacagcccaaaaagttttgaggcacataaataaaatgttgaaggctgtaatctcaagggaacaatacagccaggagctctatgctagtaacaattagcaactcatacttgaaacatcgatctttgcctgctttagaatttctgcctagtgatctgtcctgttcagctgttctgctctggaaatccaaatcaaccgtaaccctaatcgtttcgtaatttctgaattcgtaatttgcagctgaaggacatgacggtggtggacttgaaatcttacctgagtgcacatggcctcccagtttctggaaagaaagaggcactcgtcagcagaatcttgactcatctaggcaagtgaaatggtccacttcgacggcctactcagttttagctaactctgtaagctatctaaatttctctgaacatcttgaagtgcctatcaaaaaccctctccctgcttaggctgtgccaaattttgtagcaatatgacaacagctgaccccagttcatttggtatcatgtgcttttgtgacatgtaccactgggatttctcttaaatgtcactccagtctgcagagatcagatcattgttggtagaggaaagtgatccattagagaaagcaacaccaaacaagattattaagacattttttaagtgaagcagttgcaacc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001065596.1 RefSeq:Os07g0184900]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 7]]
 
[[Category:Chromosome 7]]
 

Revision as of 14:07, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information